Gene Information

Name : BN115_4219 (BN115_4219)
Accession : YP_006902441.1
Strain : Bordetella bronchiseptica MO149
Genome accession: NC_018829
Putative virulence/resistance : Virulence
Product : response regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4617695 - 4618366 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTATCCTCGTCATCGAAGACGACCTCAAGACTGGCGACTACCTGAAGAAGGGCTTGCTGGAATCCGGCTATTCCGT
GGATCTCGCCCGCAATGGCATCGACGGCCTGCACCGGCTGCGCGAGCAGCGCTACGACGTGCTGGTGCTCGATGTCATGC
TGCCGGGCAAGGACGGCTGGCAGGTCATCGAAGAGGTACGCCAGGACTCCGACGTGCCGGTCATCTTCCTGACGGCGCGC
GACCATGTCGCCGACCGCATCCGGGGCCTGCGGCTGGGCGCCGACGACTACCTGGTCAAGCCGTTCTCGTTCGCCGAGCT
GGTGCTGCGCATCCAGACGATGCTGCGGCGCGGCGCGGCGCGCGCGGCCGAAACGCTGCAGGTCGCCGACCTGCGGCTCG
ACCCGGTGCGGCGCAAGGTCACCCGCGGCGGCGCCAACATCGTCCTCACCAACAAGGAGTTCATGCTCCTGCACCTGCTC
GTCAGAAGGCAGGGCGAAGCCCTGTCGCGCACCATCATCGCATCCGAAGTCTGGGATATGAACTTCGACAGCGACACCAA
CGTGGTGGACGTGGCCATCAAGCGCCTGCGCGCCAAGGTCGACGCCCCCTTCCCCCTCAAGCTGATCCAGACCGTGCGCG
GCATCGGCTACGCCCTGGCGGAGCAGCCTTGA

Protein sequence : 
MAILVIEDDLKTGDYLKKGLLESGYSVDLARNGIDGLHRLREQRYDVLVLDVMLPGKDGWQVIEEVRQDSDVPVIFLTAR
DHVADRIRGLRLGADDYLVKPFSFAELVLRIQTMLRRGAARAAETLQVADLRLDPVRRKVTRGGANIVLTNKEFMLLHLL
VRRQGEALSRTIIASEVWDMNFDSDTNVVDVAIKRLRAKVDAPFPLKLIQTVRGIGYALAEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-55 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-54 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN115_4219 YP_006902441.1 response regulatory protein BAC0125 Protein 2e-65 62
BN115_4219 YP_006902441.1 response regulatory protein BAC0197 Protein 2e-65 59
BN115_4219 YP_006902441.1 response regulatory protein BAC0083 Protein 8e-61 57
BN115_4219 YP_006902441.1 response regulatory protein BAC0111 Protein 8e-60 57
BN115_4219 YP_006902441.1 response regulatory protein BAC0308 Protein 4e-59 56
BN115_4219 YP_006902441.1 response regulatory protein BAC0638 Protein 2e-53 55
BN115_4219 YP_006902441.1 response regulatory protein BAC0347 Protein 5e-54 54
BN115_4219 YP_006902441.1 response regulatory protein AE000516.2.gene3505. Protein 1e-29 41
BN115_4219 YP_006902441.1 response regulatory protein CP001918.1.gene5135. Protein 5e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN115_4219 YP_006902441.1 response regulatory protein VFG0596 Protein 2e-55 55
BN115_4219 YP_006902441.1 response regulatory protein VFG1390 Protein 3e-40 44
BN115_4219 YP_006902441.1 response regulatory protein VFG1389 Protein 3e-33 44
BN115_4219 YP_006902441.1 response regulatory protein VFG1386 Protein 8e-34 41