Gene Information

Name : ureC (BN115_4004)
Accession : YP_006902228.1
Strain : Bordetella bronchiseptica MO149
Genome accession: NC_018829
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4384232 - 4385947 bp
Length : 1716 bp
Strand : -
Note : -

DNA sequence :
ATGACCAGGATTTCGCGTTCGGCATATGCCGAGATTTACGGGCCGACCGTGGTCGGCGGCGTCGGCGACCGGGTGCGCCT
GGCCGATACGCTGCTGCTGGCCGAGGTCGAGAAGGACCACACCATCTTCGGCGAGGAGGTGAAGTTCGGCGGCGGCAAGG
TCATCCGCGACGGCATGGGACAGAGCCAGCGGCTGGCCACCGATTGCGTCGACACGGTGATCACCAACGCGCTGATCATC
GACGCGGTGACCGGCATCGTCAAGGCCGACATCGGCATCAAGGACGGGCTGATCAGCGGCATCGGCAAGGCGGGCAACCC
GGATACCCAGCCGGGCGTGACCATCATCATCGGCGCTTCGACCGAGGTGGTGGCCGGCGAGGGGCTGATCGTGACGGCCG
GCGCCATCGATACGCACATCCACTTCATCTGTCCGCAGCAGATCGAGGAGGCCCTGGCCACCGGCACGACCACCATGATA
GGCGGCGGCACCGGGCCGGCCACCGGGTCGCTGGCCACCACCAGCACCTCGGGTCCCTGGCACATGGCCGCCATGCTGCA
GGCGCTGGACGCCTTTCCGGTGAACGTGGGCCTGTTCGGCAAGGGCAGTTCGAGCTCGCACGGCGCGCTGCTGGAGCAGG
TGCGGGCCGGCGCCATGGGCCTGAAGATCCACGAGGACTGGGCCAGCACGCCGGCTTCCATCGACACCTGTCTGAACGTG
GCCGAGGAAACCGACATCCAGGTCGCGATCCACAGCGACACGCTCAACGAATCGGGTTTCGTGGAGGACACGTTCGCCGC
GTTCAAGGGCCGCACCATCCATTCCTTCCACACGGAAGGCGCCGGCGGCGGCCACGCGCCGGACATCATCCGGGCCGCCG
GCATGCCCAACGTGCTGCCGGCCTCGACCAACCCGACCATGCCGTTCACGCGCAACACGATCGACGAGCACCTGGACATG
GTCATGGTGTGCCATCACCTGGATCCGTCGATCGCCGAGGACCTGGCTTTCGCCGAAAGCCGGATCCGGCGCGAGACCAT
CGCGGCCGAGGACATCCTGCACGATCTGGGGGCGTTCTCCATCATGAGCTCGGACTCGCAGGCCATGGGGCGGGTGGGCG
AGATCGTCCTGCGCACCTGGCAGACCGCGCACAAGATGAAGCTGCAGCGCGGCCCGCTGCAAGGCGACAGCGACCGCTCG
GACAATGAGCGCATCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCCGTGGCGCATGGCATCGCGCACCTGGTGGG
CTCGGTGGAAGTGGGCAAGCTGGCCGACCTGGTGCTGTGGAAGCCCGCGTTTTTCGGCGTCAAGGTCAACATGGTGCTCA
AGAGCGGCATGGCCGTCAGCGCCAGCATCGGCGACATGGGCGCCTCGATCTCGACGCCGCAGCCGGTGCAGATCCGCCCC
ATGTGGGGCAGCCATGGCAAGGCGCTGCGCACCTCGGTGGCCTTCGTCTCGCAGGTCAGCCTGAGCAATCCGGCGGTCAG
CGAACTGGGGCTGAACAAGCGCCTGGAGGCGGTGCGGGGATGCCGCGGCGTGACCAAGCGCGACATGGTGCGCAACAACT
GGCTGCCGGCGATCTCGGTCGACCCGCAGACCTACCAAGTCTATGCCGACGGGCAATTGCTCAAGTGCGAGGCGCTTGCC
GAGCTGCCCATGGCGCAACGCTATTTCCTGTTCTGA

Protein sequence :
MTRISRSAYAEIYGPTVVGGVGDRVRLADTLLLAEVEKDHTIFGEEVKFGGGKVIRDGMGQSQRLATDCVDTVITNALII
DAVTGIVKADIGIKDGLISGIGKAGNPDTQPGVTIIIGASTEVVAGEGLIVTAGAIDTHIHFICPQQIEEALATGTTTMI
GGGTGPATGSLATTSTSGPWHMAAMLQALDAFPVNVGLFGKGSSSSHGALLEQVRAGAMGLKIHEDWASTPASIDTCLNV
AEETDIQVAIHSDTLNESGFVEDTFAAFKGRTIHSFHTEGAGGGHAPDIIRAAGMPNVLPASTNPTMPFTRNTIDEHLDM
VMVCHHLDPSIAEDLAFAESRIRRETIAAEDILHDLGAFSIMSSDSQAMGRVGEIVLRTWQTAHKMKLQRGPLQGDSDRS
DNERIKRYIAKYTINPAVAHGIAHLVGSVEVGKLADLVLWKPAFFGVKVNMVLKSGMAVSASIGDMGASISTPQPVQIRP
MWGSHGKALRTSVAFVSQVSLSNPAVSELGLNKRLEAVRGCRGVTKRDMVRNNWLPAISVDPQTYQVYADGQLLKCEALA
ELPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-170 67
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-170 67
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-158 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-158 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-158 61
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-158 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_006902228.1 urease subunit alpha VFG0270 Protein 5e-144 59