Gene Information

Name : BN115_0364 (BN115_0364)
Accession : YP_006898624.1
Strain : Bordetella bronchiseptica MO149
Genome accession: NC_018829
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 383892 - 384605 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGTGGCAGTGTCTGCTTATTGAGGATGATCAAGCCAACGCGCGCTATCTCGCCAATGGCCTGACGGAGCTAGGGCACAT
GGTTACCGTCAGCGGGGATGGGGCGAGCGGCCTGGAAAATGCCATGAAGGACCAATGGGACATCATCATCCTGGACCGCA
TGCTGCCCAATAACGTGGATGGCCTTTCAATACTTTCCACGCTGCGGGCGCTGGGCAAGAAAACGCCGGTCCTGGTGCTC
AGCGCGCTGTCGGCTGTCGACGACCGGGTTGACGGTTTACGGGCCGGCGGTGACGACTATCTGGTCAAGCCGTTCTCCTT
CTCCGAGCTGGTTGCCAGGCTGGACGCCCTGGTCAGGCGGACGCGCCCCGATCCGGACGTGAAGGAACTGCGGATTGCGG
ATCTGTCGGTCAATGTCGCCACGCAGAAAGTGCAACGCGCCGGAAGACCAATATCCCTGCAGCCGCAGGAGTTCCGGTTA
TTGGTCTATCTCATGCTGCACGCTCACCGGATCGTGACGCGAACGATGTTGCTCGAGACGATCTGGGGCTACAGCTTCGA
CCCGCAGTCCAATGTGATCGATGTCCAGGTCAGCCGGTTGCGCCGCAAGATAGACACTGCCTCCACGACCCCGCTGATTC
ACACCGTACGCGGCGCCGGATATACCCTTTCCGACAAGCAGGGGCCCGGCAACATGGACCTCGACAAAGAATGA

Protein sequence : 
MWQCLLIEDDQANARYLANGLTELGHMVTVSGDGASGLENAMKDQWDIIILDRMLPNNVDGLSILSTLRALGKKTPVLVL
SALSAVDDRVDGLRAGGDDYLVKPFSFSELVARLDALVRRTRPDPDVKELRIADLSVNVATQKVQRAGRPISLQPQEFRL
LVYLMLHAHRIVTRTMLLETIWGYSFDPQSNVIDVQVSRLRRKIDTASTTPLIHTVRGAGYTLSDKQGPGNMDLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-38 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN115_0364 YP_006898624.1 transcriptional regulator BAC0308 Protein 7e-42 45
BN115_0364 YP_006898624.1 transcriptional regulator BAC0125 Protein 2e-40 44
BN115_0364 YP_006898624.1 transcriptional regulator BAC0347 Protein 1e-42 44
BN115_0364 YP_006898624.1 transcriptional regulator BAC0197 Protein 2e-38 43
BN115_0364 YP_006898624.1 transcriptional regulator BAC0111 Protein 6e-45 43
BN115_0364 YP_006898624.1 transcriptional regulator AE016830.1.gene1681. Protein 5e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN115_0364 YP_006898624.1 transcriptional regulator VFG0596 Protein 3e-38 44
BN115_0364 YP_006898624.1 transcriptional regulator VFG1389 Protein 2e-36 43
BN115_0364 YP_006898624.1 transcriptional regulator VFG1390 Protein 5e-40 41