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Name : gabD (BN115_0308) Accession : YP_006898569.1 Strain : Bordetella bronchiseptica MO149 Genome accession: NC_018829 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 321398 - 322879 bp Length : 1482 bp Strand : + Note : - DNA sequence : ATGTCCTTATCCGTCGGCAACGCGGCGCTGCTGCCTGGCCGCAACCTGATTGGATCGGAATGGCGCGAAGCGGCGCTGGG CGCGCGCTTCGCGGTTGCGGATCCCGCCACCGGCAAGGTGATCGCGCACGTGCCCGACAGCGGCGCGCGCGATGCGGGCG CGGCCGTCACGGCGGCGCACCTGGCTTTCGCCGACTGGCGCCGGACCCCCGCCAAGGTTCGCGCGCAGATCATCAAACGC TGGAATGCCCTGTTGCACGAGAACGCCGAAGACCTGGCCCGTCTGATTTCCTCGGAGCAGGGCAAGCCGCTGGCCGAGGC GCGCGGCGAGGTGAGCTATGCGGCCAGTTATGTCGAGTGGTTCGCCGAGGAGGCCACGCGCGCCGACGGCGACCTCATCC CCAGCCCGGCGCAAGGGCGGCGCATGTTCGCGCTGCGCGAGCCGGTCGGCGTGGTGGCGGCGATCACGCCGTGGAACTTC CCGGCGGCCATGATCGCCCGCAAGATCGCCCCGGCCCTGGCGGCCGGGTGCACGGTCGTGTGCAAGCCGGCCGAGGACAC GCCGCTGACATCGCTGGCGCTGACGGCCCTGGCGCAGCAGGCGGGGGTGCCGCCCGGCGTGCTCAACATCGTGACCGCCT CGCGGGGCCGCGCCGCCGAAGTCGCCGACGCCTGGCTGGACGACCCGCGCGTGCGCAAGATCACCTTTACCGGCTCCACC CCCGTGGGCAAGCATCTGGCCAGGCGCAGCGCCGACACCTTGAAGCGGGTCTCGCTGGAGCTGGGCGGCAATGCGCCTTT CATTGTGTTCGACGACGCCGACCTGGACGCCGCCGTCGAGGGCCTGATGGTGTCCAAGTTCCGCAATGGCGGCCAGACCT GCGTCTGTCCCAACCGCATCTTCGTGCAGGCCGGCGTGCACGACGCGTTCGTCCGCAAGCTGGCGGCGCGGGTGGAGGGG CTGGTCGTCGGGCCGGCCAGCGACCCGGCTTCGCAGATCGGGCCGATGATCAACGCGCGCGCCGTCGAGAAGATCGAGCA TCACGTCGCCGACGCCCTGGAGCGCGGCGCGCGCCTGGAGACGGGCGGCAAGCGCATCCACTCGGCCCGTTGCGCCGGCG ACCACTATTACGCGCCGACCGTGCTGACGGGGGTGGACGAGACCATGGCCTGCTTTCGCGAGGAAACCTTCGGACCGGTC GCGCCGATCACCATCTTCGCCAGCGAGGCCGACGTGGTGGCGGCGGCCAATGCGACCGCGTTCGGCCTGGCCGCCTACTT CTACTCGACCGACGTGCGGCGCATCTGGCGCCTGGCCGACGCGCTGGAGACCGGCATCGTCGGCGTCAACGAGGGCGCGC TGGCCGCCGAGGCGGCCCCGTTCGGCGGCGTCAAGGACTCGGGTTACGGCCGCGAAGGATCGCGCCATGGCCTGGCCGAG TACATGCAGATCAAGTACGTCTGCCAGGGCCAGCTGGACTGA Protein sequence : MSLSVGNAALLPGRNLIGSEWREAALGARFAVADPATGKVIAHVPDSGARDAGAAVTAAHLAFADWRRTPAKVRAQIIKR WNALLHENAEDLARLISSEQGKPLAEARGEVSYAASYVEWFAEEATRADGDLIPSPAQGRRMFALREPVGVVAAITPWNF PAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALTALAQQAGVPPGVLNIVTASRGRAAEVADAWLDDPRVRKITFTGST PVGKHLARRSADTLKRVSLELGGNAPFIVFDDADLDAAVEGLMVSKFRNGGQTCVCPNRIFVQAGVHDAFVRKLAARVEG LVVGPASDPASQIGPMINARAVEKIEHHVADALERGARLETGGKRIHSARCAGDHYYAPTVLTGVDETMACFREETFGPV APITIFASEADVVAAANATAFGLAAYFYSTDVRRIWRLADALETGIVGVNEGALAAEAAPFGGVKDSGYGREGSRHGLAE YMQIKYVCQGQLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-119 | 55 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 7e-76 | 41 |
