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Name : wcbA (BN115_2221) Accession : YP_006900458.1 Strain : Bordetella bronchiseptica MO149 Genome accession: NC_018829 Putative virulence/resistance : Virulence Product : capsular polysaccharide export protein Function : - COG functional category : - COG ID : - EC number : - Position : 2423304 - 2425361 bp Length : 2058 bp Strand : + Note : - DNA sequence : ATGATCGAACTCCATTCGTCAGGCATCGCGCGTATTCCGTACCTGACGGAGCTGCTGGGCGCGCCGGTCACCCGCTACCG GCGCTTCTGGCCGCCGGGCGGCGCGGCGCCGCGCGCGGTGGCGGGATGGGGCGCGCGCCCCAGCGCCGCGCCGGCGCGGC GCCGCGCCCGTTCGCTGGGCGTGCCCTACATTGCGCTGGAAGACGGTTTCCTGCGCTCGTTCGGCACCGGGCGCCATTTC CCGCCCCTGTCGCTGGTGGTCGACCGCCTGGGCATCTACTACGACGCGACGCGCGAATCCGAGCTGGAGTGTCTGCTGGC GTCGTCGCGCACGCTGCTCGACGGCATCGAGGACGCCGTGCCCGAAGCCATGGAGCTGGTGCGCGAACGCCGCCTGTCGA AGTACAACCAGGGCGGCTTCCTGGCCACCGGCGTGCCGGCCGACGGCCGGCGCCGGGTGCTGGTGGTGGACCAGACCGAA GGCGACATGAGCGTGACGCTGGGTTGCGCCGAGGCGGCCACCTTCGAGGCCATGCTGGCGGCGGCGCGGGCGGAGAACCC CGGCGCGCTGATCTGCGTCAAGACGCATCCCGAGGTGGCGGCCGGCGACAAGTCGGGCTATCTGTCGCGGGTCGCCGACG ACGCCGATACGGTGGTGCTGCGCCACGACATGAATCCCCTGGCCTTGCTGGAACAGATGGACCGGGTCTATGTGGTCAGT TCGCAGATGGGGTTCGAAGCCTTGATGCTGGGCAAGCCCGTGGCCTGCTTCGGCATGCCCTGGTATGCCGGCTGGGGCGT GACCGACGATCGCCAGCGCTGCGAGCGGCGCGGCCGCGAGCGCAGCGTCGAGGAGCTGTTCGCCGGCGCGTATTTCCACT ACACCCGCTACCTGGATCCGGTGCTGCATCGCCGCGGCACGATCTTCGACGTGATCGACTGGCTGACGCGCCAGCGCGAC ATGGCGCAGCGCCTGCCGTCGCGCGTGATCGGCGTGGGCATGCGCCGCTGGAAGGCGGCCGCGCTGGCGCCCATGCTGGC GTTGAAGCCCGGCCAGGCGGTGTTCGCCGCCGACGCCGCCCGCGCGCGGGACCTGCGGCCGGCCGCGGGCGACGCCCTGG TGCATTGGGGCGCCCGGGCGCCCGCCGGCGTGGCCGAGCTGGCCGAACAGAGCGGTTGCGCCGTACTGGCCGTGGAGGAT GGCTTCCTGCGGTCGGTCGGCCTGGGGTCGGACCTGATCCGGCCGCTGAGCCTGGCGCTGGACGGGCGGGGCATCTACTT CGATCCCCGCCAGCCCAGCGATCTGGAGCATGAATTGAACCGGGGCGGGTTCAGCCCGGGAGAGCTGGCCAGCGCGGCGC GCATCCGCGCGCTGGTGGTCGCCCACGGCATCACCAAGTACAACGTGGCGCAGCCCCAGCCGGCCGACTGGCCGGCGCGC GGGCGCGAGATCGTGCTGGTGCCCGGCCAGGTCGAGGACGATGCGTCGGTGCGGCTGGGCTGCGACGAAGTCCGCACCAA CCTGGACCTGCTGGCGGCCGCGCGCGCCGCGCATCCCGACGCCTACATCGTCTACAAGCCGCATCCGGACGTGGTCAGCC GCAACCGCCGCGGCCGCGTGGCGCTGCGCGAGGCGCGCCGCCATGCCGATCATGTCGAGTCCGCGCTGTCGGTGGTCAGC TGCATCCAGGCGTGCGACGTGGTGCACACCATGACCTCGCTGACGGGCTTCGACGCCTTGCTGCGCGGCAAGCGCGTGGT GACGTACGGCAAGCCGTTCTATGCCGGCTGGGGCCTGACCGAGGACCGCGCCGCCGATTGGCCGCGCGACCGGCGCACCC GCCGGCTGAGCCTGGACGAGCTGGTCGCCGGCACGCTGCTGCGCTATCCGCTGTACTGGGATTGGGAGCTGCGCGGCTAC ACCACGTGCGAGGCGGTGCTGACGCATATTTTCGAGACGCGCGAACGCCTGCAGCGCGAAGGCCGCCTGCAACAGCTGCG CGCCGGCTACGCGCGCCGCCAGGTGCGCAAGCTGCAGACACTGTGGCTGGCCCGATGA Protein sequence : MIELHSSGIARIPYLTELLGAPVTRYRRFWPPGGAAPRAVAGWGARPSAAPARRRARSLGVPYIALEDGFLRSFGTGRHF PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAMELVRERRLSKYNQGGFLATGVPADGRRRVLVVDQTE GDMSVTLGCAEAATFEAMLAAARAENPGALICVKTHPEVAAGDKSGYLSRVADDADTVVLRHDMNPLALLEQMDRVYVVS SQMGFEALMLGKPVACFGMPWYAGWGVTDDRQRCERRGRERSVEELFAGAYFHYTRYLDPVLHRRGTIFDVIDWLTRQRD MAQRLPSRVIGVGMRRWKAAALAPMLALKPGQAVFAADAARARDLRPAAGDALVHWGARAPAGVAELAEQSGCAVLAVED GFLRSVGLGSDLIRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVAQPQPADWPAR GREIVLVPGQVEDDASVRLGCDEVRTNLDLLAAARAAHPDAYIVYKPHPDVVSRNRRGRVALREARRHADHVESALSVVS CIQACDVVHTMTSLTGFDALLRGKRVVTYGKPFYAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLYWDWELRGY TTCEAVLTHIFETRERLQREGRLQQLRAGYARRQVRKLQTLWLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 6e-96 | 45 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 1e-77 | 44 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 2e-77 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcbA | YP_006900458.1 | capsular polysaccharide export protein | VFG0692 | Protein | 9e-94 | 47 |
| wcbA | YP_006900458.1 | capsular polysaccharide export protein | VFG0704 | Protein | 8e-86 | 46 |
| wcbA | YP_006900458.1 | capsular polysaccharide export protein | VFG0259 | Protein | 3e-96 | 45 |
