Gene Information

Name : fimB (BN115_2157)
Accession : YP_006900395.1
Strain : Bordetella bronchiseptica MO149
Genome accession: NC_018829
Putative virulence/resistance : Virulence
Product : chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2345639 - 2346463 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :
ATGAATACATACGCTTGTGACGGGGCGCTCGCGCAGAGCCGGCCCCAGGGATGGTTTACGCCTGCATTTACGGTAAAGCG
GCAAGGCGGCATGGCGCGCTGGCGCCGGCGGCTGGGCGTCGCGGCGCTGGGCGCCGCCATGCTGGCGAGCCTGGCGCCGG
CCGCCCGTGCCAGCCTCGTCATCACGGGTACGCGCGTGATCTACAACGCGGGCTCGCCCGAGACCACGGTGAAGATGAGC
AACGAGGGGCAGGCCCCCGCGCTGATGCAGGCATGGATCGATGACGGCAATGCCGAGGCGAAGCCGGACGAAGTCCAGGT
GCCGTTCTTCCTGACGCCTCCGCTGGCGCGGGTGGACCCGGGCAAGGGGCAGACCTTGCGCATTTTCTTCAATGGCTACC
CGGATGGCAAGACGCTGCCGTCCGACCGCGAATCGGTCTTCTGGCTGAACGTTCTCGAAGTGCCGCCCAAGGCGACGCCC
GAGGAAGGCCACGGGGTCCTGCAGCTGACCATCCGCTCGCGCCTGAAGCTGTTCTATCGCCCCAAGGGCCTGCCCGGCAA
CCCGCTGACGGCCGCCGCCGACCTGACCTTCAAGCGCAAGGCCAACGGCGTGCTGGAGGTGCACAACCCGACGCCGTACT
ACGTGAACCTGCAAAAGCTGGAGGTGGGCGAGAACGGCGCGCACGGCAGCAAGACGCCGTGGATGCTGGCGCCGCTTTCC
TCGGACGAGTTGCGGCTGAAAGGGACGGGGGCCAAGTCGGTGCAGTACTGGGCCATCGACGACTTCGGCGGCGTGACGCC
ATATCAGGCGGCCATAGCGGACTGA

Protein sequence :
MNTYACDGALAQSRPQGWFTPAFTVKRQGGMARWRRRLGVAALGAAMLASLAPAARASLVITGTRVIYNAGSPETTVKMS
NEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATP
EEGHGVLQLTIRSRLKLFYRPKGLPGNPLTAAADLTFKRKANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPWMLAPLS
SDELRLKGTGAKSVQYWAIDDFGGVTPYQAAIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 3e-39 43
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimB YP_006900395.1 chaperone protein VFG0007 Protein 3e-97 99
fimB YP_006900395.1 chaperone protein VFG1145 Protein 2e-34 45
fimB YP_006900395.1 chaperone protein VFG1468 Protein 1e-31 41