Gene Information

Name : BN117_0823 (BN117_0823)
Accession : YP_006894841.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 889381 - 890406 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence : 
ATGACGAATCGCTTTGAGACCACGTGCGCGCAGTTGCGGGCCCAACCCCAGAAATGGCTGGTGACCGGCTGCGCCGGCTT
CATCGGCTCGAACCTGCTCGAGACGCTGCTCGGGCTGGACCAGGCGGTGGTGGGGCTGGACAACTTCGCCACGGGGCACC
AGCACAACCTGGACGAGGTGCGCGCGGCGGTGACGCCCGAGCAATGGGCGCGCTTCACCTTCATCGAAGGCGACATCCGC
GACCTGGCGGCCTGCCAGCGCGCCGTGCAGGGCGTGGACCGGGTGCTGCACCAGGCCGCGCTGGGTTCGGTGCCGCGTTC
GCTGAAAGACCCGATCACGACCAACGAGGTCAACATCGGCGGTTTCCTGAACATGCTGGTGGCCGCGCGCGACGCGCAGG
TCCAGGCGTTCGTCTATGCGGCCTCGAGCTCGACCTACGGCGACCATCCCGACCTGCCCAAGGTCGAGGAGCGCATCGGC
AATCCGCTCTCGCCGTACGCGGTGACCAAGTACGTCAACGAGCTGTACGCCGACGTGTTCGCGCGCTCGTACGGGTTTTC
CAGCGTGGGGCTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGACGGCGCGTACGCGGCGGTGATTCCGAAGT
GGACGGCGGCGATGATCAAGGGCGAGGACGTCGTGATCAACGGCGACGGCCAGACCAGCCGCGACTTCTGCTTCGTGGAG
AACGCGGTGCAGGCCAACCTGCTGGCGGCGATGGCCGCACCGGAAAGCGCGAACCAGGTCTACAACGTGGCGTACAACGC
GCGCACGACGCTGACCGAGCTGTTCGAGCACCTGCGGCGCGCGCTGGCCGGGCAGGGCGTGTCGTACGAGAAGGCGCCGG
TGTACGCGGAATTCCGCGCCGGCGACGTGCGCCACTCGCAGGCCGACATCGGCAAGGCCGGCAAGCTGCTGGGCTACGAG
CCGGCCTACGACATCCTGCGCGGGCTGGAAGCCGCCATGCCCTGGTACAAGCAATTCCTGCGTTGA

Protein sequence : 
MTNRFETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIR
DLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIG
NPLSPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVE
NAVQANLLAAMAAPESANQVYNVAYNARTTLTELFEHLRRALAGQGVSYEKAPVYAEFRAGDVRHSQADIGKAGKLLGYE
PAYDILRGLEAAMPWYKQFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-98 63
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-98 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_0823 YP_006894841.1 capsular polysaccharide biosynthesis protein VFG0430 Protein 1e-98 63