Gene Information

Name : BN117_0810 (BN117_0810)
Accession : YP_006894828.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : ABC transpoter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 873533 - 875191 bp
Length : 1659 bp
Strand : -
Note : -

DNA sequence :
ATGCCCTACGCCCCCTACCCTCCGGCCGGCGACACCAGCGCCGCGGTGCTGGCGATCCGCAACCTGTCGGTGAGCGTCTG
CGGCGCGGGCAACCGCGTGGTCCGCAACCTCAGCCTGGACGTGCACGCCGGCGAGACGGTCTGCGTGGTGGGCGAATCCG
GGTCGGGCAAGTCGGTCACGTCGCTGGCGGTCATGGGATTGCTGCCCGAGGGCATCCTGGAGGTCTCCGGCGGCTCGGCC
CGCGTGCTGGGCGAGGACATCGTCACGGCCAGCGCGCGGCGGCGGCGCGAACTGCGCGCCACGCGCATGGCCATGGTGTT
CCAGGAACCCATGACCGCGCTCAACCCGGTGCACCGGGTGGGGCGCCAGGTCGACGAAGTGCTGCGCCTGCATCGCCACA
TGCCGCGCGCGCAGCGGCGCGCCAAGGTGCTCGAGATGTTCCGCTCGGTGCACCTGCCCGACGTGGAGCGCATCTACGAC
GCATATCCGCACCAGCTCTCGGGTGGCCAGCGCCAGCGCATCGTCATCGCCATGGCCCTGATCCTCGAACCCAAGCTGCT
GATCGCCGACGAGCCCACCACGGCGCTGGATGTCACGACGCAGAAGCAGATCCTGGCGCTGATCCGCGAGCTGCAGCACA
GGCACCAGACCGCCGTGCTCTTCATCACCCACGACTTCGGCGTGGTGGCCGAGATCGCCGACCGTATCGTCGTCATGAAC
CGCGGCGACCTCACCGAGACCGGCACGCGCGAGGAAATCCTGGCGCGGCCGCGCCAGAACTACACCCGCCGCCTGGTGTC
CTCGGTGCCCAGCCTGGTGCCGACGCAGCGCGAGCCGCCGCACGGCGAACCGGTGCTGCGCATCACCGGGCTGGGCCGCA
CCTACGCCGAGCGGCGCTCGCTCTTCGGCGCGACGCGCACGGTGGTGGCCGCCAGCGAGGTGGACCTGACCCTGCGGCGC
GGCGAGATCCTCGGCATCGTCGGCGAATCGGGTTCGGGCAAGTCCACGGTGGCGCGCTGCATCGTGCGCCTGATCGAGCC
CAGCGCCGGCCGCATGCTGCTGGGCGAAACCGACATCGCGCGCCTGAGCGGCGCGGGCCTGCGTCCGCTGCGGCGCAAGG
TGCAGATCGTGTTCCAGGACCCCTACCGGTCGCTGAACCCGCGCCGCGCGGTGGGCGAGTCCATCATCGAGGGCCTGCTC
AACTTCGGCATGCCGCGCGCGCAGGCGCTGGTGCGCGCCGCCCGCACCCTGGGCGTGGTCGGCCTCGGTCCCGACGTGAT
GCGGCGCTACCCGCACCAGTTCTCGGGCGGCCAGCGCCAGCGCCTTTGCATCGCGCGCGCCCTGGTCATGGACCCCGAAG
TGCTGGTGGCCGACGAAGCCGTTTCGGCGCTGGATGTATCGGTGCAGGCGCAGGTGCTGGAGCTGATCGAGCAGGTGCGC
GAACGTACCGGCGTGAGCGTGCTGTTCATCACGCACGACCTGCGCGTGGCGGCGCAGGTGTGCGACACCATCGCGGTCAT
GCAGCATGGCAAGGTGGTGGAGACCGGCGCGGCGCAGACGGTGCTGACCCGGCCCGGCCATGCGTATACCCGCGCCCTGA
TCGACGCCGCGCCGGGCCGCGGCTGGGATTTCCGCAATTTCCGCCCGCTGCCCGCCTGA

Protein sequence :
MPYAPYPPAGDTSAAVLAIRNLSVSVCGAGNRVVRNLSLDVHAGETVCVVGESGSGKSVTSLAVMGLLPEGILEVSGGSA
RVLGEDIVTASARRRRELRATRMAMVFQEPMTALNPVHRVGRQVDEVLRLHRHMPRAQRRAKVLEMFRSVHLPDVERIYD
AYPHQLSGGQRQRIVIAMALILEPKLLIADEPTTALDVTTQKQILALIRELQHRHQTAVLFITHDFGVVAEIADRIVVMN
RGDLTETGTREEILARPRQNYTRRLVSSVPSLVPTQREPPHGEPVLRITGLGRTYAERRSLFGATRTVVAASEVDLTLRR
GEILGIVGESGSGKSTVARCIVRLIEPSAGRMLLGETDIARLSGAGLRPLRRKVQIVFQDPYRSLNPRRAVGESIIEGLL
NFGMPRAQALVRAARTLGVVGLGPDVMRRYPHQFSGGQRQRLCIARALVMDPEVLVADEAVSALDVSVQAQVLELIEQVR
ERTGVSVLFITHDLRVAAQVCDTIAVMQHGKVVETGAAQTVLTRPGHAYTRALIDAAPGRGWDFRNFRPLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-80 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-80 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 42