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Name : BN117_0555 (BN117_0555) Accession : YP_006894604.1 Strain : Bordetella parapertussis Bpp5 Genome accession: NC_018828 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 597292 - 599307 bp Length : 2016 bp Strand : - Note : - DNA sequence : ATGCGCGTGTTCCTGTGCGAGAAGCCGTCCCAGGGCAAGGACATCGCCCGTGTGCTGGGTGCCGGTCAACGCGGCAACGG CTACTACAGCGGCGCGGGTGTCGTCGTGACCTGGTGCATCGGTCATCTGGTGGAGGCGGTTCCGCCCGAAGGCTACGGCG AACAATACAAGCGCTGGGCCATCGAGCAACTGCCCATTCTTCCTGAGCGTTGGCGTGTCGAGCCCAAGGCGGCGACCGCG GCGCAATTCAAGGTCGTGCAGCAGCTCGTCGCCAAGGCGGGCGAGCTGGTGATAGCGACCGACGCCGACCGCGAGGGCGA GATGATCGCCCGCGAGATCATCGACCTGTGCGGCTACCACGGGCCGATTCAGCGCCTGTGGCTGTCGGCGCTCAACGATG CGTCGATCCGCAAGGCGCTGGGTGCGCTCAAGCCGTCCGCCGAGACGCTGCCGCTGTACTACTCGGCCCTGGCCCGCTCG CGTGCCGACTGGCTGATCGGCATGAACCTGAGCCGGCTGTTTACGCTTCTAGGTCGGCAGGCCGGCTACACCGGCGTGCT GTCGGTGGGGCGCGTGCAGACGCCGACGCTGAAGTTGGTGGTGGATCGTGATCGCGAGATCGCGCGCTTCGTCTCTGTGC CGTATTGGGCCGTGGACGTGCTGCTATCCCATGCCGGCCGGTCCTTCACCGCGAGCTGGATACCGCCCGAAGGCAGCACC GATGCAGCGGGTCGCTGCCTTCAGCAGCCGGTGGCGCAGCAGGCTGCGGATTGCATTCGCGCCGCACGCGATGCGCAGGT CGTGTCGGTGGACACCGAGCGCGTGCGCGAGGCACCGCCGCTGCCGTTCGACCTGGGCACGCTGCAGGAGGTGTGCTCCA AGCAGTTGGGCCTCGACGTGCAGGAGACGCTGGACATCGCGCAGGCGCTGTACGAGACGCACAAGGCGACGACCTATCCG CGCAGCGACTCGGGATACCTGCCCGAAAGCATGCTCGCGAAAGTGCCGGCGGTGCTCGATGCACTGCTCGCCACCGATCC CAGCCTGCGGCCCTTGATCGGCCAGCTCGACCGCAACCAGCGTTCGCGCGCCTGGAACGACGGCAAGGTGACGGCTCACC ACGGCATCATCCCGACGCTGGAGCCCGCCAACCTGTCGGCCATGAACGAGAAGGAACTGGCCGTCTACCGGCTGATCCGC GCCCATTACCTCGCGCAGTTCCTCCCGCACCATGAGTTCGACCGGACGGTGGCGCAGTTCTCGTGCGGCAGTCAGTCGCT GGCGGCCGTGGGCAAGCAGATCGCCGTCACCGGCTGGCGCGAGGTGCTGGCGACGCCGGGGCCGGACGATGCCGATGGCG AGGATGCGCAGCGCAGCCAGGTGCTGCCGGCGCTGCATGCGGGCCTGTCCTGCCCGGTCGGGAAGGTGGATCTCAAGGCG CTGAAGACGCTGCCGCCCAAGCCCTACACGCAGGGCGAGCTGATCAAGGCCATGAAGACCGTCGCCAAGTTCGTGACCGA CCCGCGGCTGAAACAGAAGCTGCGAGATACCACCGGCATCGGCACCGAGGCGACACGCGCCAACATCATCAACGGTCTGA TCGGTCGCGGCTACCTGGTCAAGAAAGGCCGCGCCGTCCGCGCTTCCGACGCGGCATTCACGCTCATCGACGCGGTGCCC TCGGCCATCGCCGACCCCGGCACCACGGCGGTGTGGGAGCAGGCGCTCGACATGATCGAGGCCGGCCAGATGGCGTTGGA CACCTTCATCGAGAAGCAGTCCGTGTGGGTCGGTCAGCTCGTGCAGCAGTACCGCGGCGCGACGCTCTCGCTCAAGCTGC CGCCGACGCCGGCCTGCCCACAGTGCGGCGCACCGATGCAGCAGCGCACGGGCAAGAGCGGCGCGTTCTGGTCCTGCTCG CGCTACCCGGACTGCAAGGGCACGTTGCCGATCGAGTCCCCGACGGGCCGGCGCAGCGCACCGCGCAAGCGGCGCGCTGC CTCCAAGGCGTCCTGA Protein sequence : MRVFLCEKPSQGKDIARVLGAGQRGNGYYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWAIEQLPILPERWRVEPKAATA AQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYHGPIQRLWLSALNDASIRKALGALKPSAETLPLYYSALARS RADWLIGMNLSRLFTLLGRQAGYTGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAVDVLLSHAGRSFTASWIPPEGST DAAGRCLQQPVAQQAADCIRAARDAQVVSVDTERVREAPPLPFDLGTLQEVCSKQLGLDVQETLDIAQALYETHKATTYP RSDSGYLPESMLAKVPAVLDALLATDPSLRPLIGQLDRNQRSRAWNDGKVTAHHGIIPTLEPANLSAMNEKELAVYRLIR AHYLAQFLPHHEFDRTVAQFSCGSQSLAAVGKQIAVTGWREVLATPGPDDADGEDAQRSQVLPALHAGLSCPVGKVDLKA LKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIGRGYLVKKGRAVRASDAAFTLIDAVP SAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSVWVGQLVQQYRGATLSLKLPPTPACPQCGAPMQQRTGKSGAFWSCS RYPDCKGTLPIESPTGRRSAPRKRRAASKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 80 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 79 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 65 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-171 | 52 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-171 | 52 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-172 | 52 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-168 | 52 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 5e-170 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 3e-124 | 41 |
