Gene Information

Name : BN117_0546 (BN117_0546)
Accession : YP_006894595.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 586662 - 588965 bp
Length : 2304 bp
Strand : -
Note : -

DNA sequence :
GTGCATGCCCCATTGCTTTGGAGCATCACCATGTCCCTCGATCTCGAAACCGTTCCCGAAACCGCTGTGCAGGGCGACCT
GCTCGAAGCGGCCGCTTCACCTCTCACGCTCAGCCTGCAGGACTTCGTATCGGAGTTCGGCGACGAGCTGCTCGATTCGC
TCAACCGCGCCAATCCGCCGGTCTACACCGGCCAGGTGCGGGTGCATCGGCAACTGATCCTCGCCGCGCTCAAGCGCAAG
CTGTTCCCGGCGCAAGCCGATGTGGTCCACGCCGTCACCGAGCTGTTGGTCGATCGCGGCGAACGCGCCGCGATCGTCAA
CGGCGAGATGGGCTGCGGCAAGACGACGGTGGGTATTGCCACCGCCGCCGTGCTCAACGCCGAGGGCTACCGCCGCACCC
TGGTGCTCTCGCCACCCCACCTGGTCTACAAGTGGCGGCGCGAAATCCAGGAGACGGTGGCCGGTGCCAAGGTCTGGGTG
CTCAATGGCCCGGACACGCTGGTCAAGCTGCTGAAACTGCGCGAGCAGTTGGGCGTGCCGGCCCAGGGCCAGGAGTTCTT
CGTCCTGGGCCGCGTGCGGATGCGGATGGGGTTCCACTGGAAACCTGTCTTCACCCGCCGACGCACGCTTCACGGCGACG
TGGCGGCCTGCCCGGATTGCGGCCACATCATCACCGACCTCGACGGCGAGCCGATCAACCCGGTCGAACTCGAAGCCGAG
GAGTACCGCCGCAAGTGCAGCCACTGCCGTGCACCGCTGTGGTCGTTGATCCGTCCCAGAGGCCTGTCCGCCAGCGACCA
GTCCTCGACCGTGCTCAAGGCACTGAAGCGTATTCCAACCATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCG
GTGACGCCTTCCTCGCGTCGATGCTCGGGGATAACATCCACGAGTTCATCAACCTGATGGATGGCAACGGCGAGCTGGTC
TTCTCGGATCGGCAAGCCCATCGCATGGAACGTGCGATGGCCAACATGGAGTTCGGCTTCGGCGAGGGCGGCTACCAGCC
GTCCGAGTTCATCAAGAGGCAGCTTCCCCAAGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACG
GCGGCTCCGCTCAGGGCCAGGCCATGGGGGTGTTGGCGGCCAAGGCGCGCAAGACGCTGCTGCTCACCGGCACACTGATG
GGCGGCTACGGCGACGACCTGTTCCACCTGCTGTTCCGAGCCCTGCCGGGGCGGATGATCGAAGACGGCTACCGGCCGAC
GAAGAGCGGCAGCATGACGTCGGCCGCGATGGCGTTCATGCGCGATCACGGGGTGCTCAAGGACATCTATTCCGAGAGCA
CCGGCACGGCGCACAAGACAGCCAAGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCGCCGGGTTTCGGGCCCAAGGGC
GTGCTGCGTTGCGTCCTGCCGTTCACGGTCTTCCTCAAGCTGAAGGACATAGGTGGCAACGTGCTGCCGCCCTACGACGA
GGAGTTCCGCGAAGTCGCGATGGACACGGCGCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGCCTGACCCAGGAGCTGA
AGCAGGCCCTGGCGAAGCGCGACACGACGCTGCTCGGTGTAGTCCTCAACGTGCTGCTGGCCTGGCCGGACTGCTGCTTC
CGGTCGGAAACGGTGGTGCATCCGCGCACGCGCAACACCTTGGCGTTCGTGCCGGCTCAGTTCAACGAGCTGGAGGTGAT
GCCCAAGGAACGCGAGCTGATCGAGATCTGCAAGCAGGAGAAGGCAGAAGGTCGCAAGACCCTGGTCTATTCGGTCTACA
CCGGCACGCGCGACACCACGTCGCGTTTGAAGGTGCTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTACTGCGCGCGAGC
GTGGATGCCTCCCGCCGCGAGGACTGGATCGCCGAGCAGTTGGACCGTGGCATCGACGTGCTCATCACCAATCCCGAGCT
GGTGAAAACCGGCCTGGACCTGCTGGAGTTCCCGACCATCGTGTTCCTCCAGTCGGGCTACAACGTGTATTCGTTGCAGC
AGGCTGCCCGGCGCTCCTGGCGCATCGGCCAGAAGCAGCCGGTGCGCGTGATCTACCTGGGCTACGCCAACTCCTCGCAG
ATGACCTGCCTGGGGTTGATGGCCCGGAAGATCACGGTGTCGCAGAGCACGTCGGGCGACGTGCCCGAGTCCGGACTCGA
TGTCCTGAACCAGGACGGCGACTCGGTAGAGGTGGCGCTGGCACGGCAGCTTGTCACGGTCTGA

Protein sequence :
MHAPLLWSITMSLDLETVPETAVQGDLLEAAASPLTLSLQDFVSEFGDELLDSLNRANPPVYTGQVRVHRQLILAALKRK
LFPAQADVVHAVTELLVDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWV
LNGPDTLVKLLKLREQLGVPAQGQEFFVLGRVRMRMGFHWKPVFTRRRTLHGDVAACPDCGHIITDLDGEPINPVELEAE
EYRRKCSHCRAPLWSLIRPRGLSASDQSSTVLKALKRIPTIGEVTAQKLMQKFGDAFLASMLGDNIHEFINLMDGNGELV
FSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRQLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLM
GGYGDDLFHLLFRALPGRMIEDGYRPTKSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKG
VLRCVLPFTVFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTQELKQALAKRDTTLLGVVLNVLLAWPDCCF
RSETVVHPRTRNTLAFVPAQFNELEVMPKERELIEICKQEKAEGRKTLVYSVYTGTRDTTSRLKVLLEQEGFKVAVLRAS
VDASRREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYANSSQ
MTCLGLMARKITVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 92
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 92
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 71
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 71
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 70
yea AAW83099.1 Yea Not tested GGI Protein 3e-176 50