Gene Information

Name : BN117_0543 (BN117_0543)
Accession : YP_006894592.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 584512 - 585240 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence :
ATGAACCTGCGGTCGTTGCTCGCTGCCGTCGTCCTTTTCGCCGCTTTCGCCGCCTTCGGCGCATCCGCCCAGCCGGCCCC
GGTGACGAACTCGCGCATGGTGCCCGCCCAGGTGCAGCCGGGCGCTGATGCCGCGCTCGACGAGAGGCAGGCGCGGGAGT
GGGGGCTTCGCTCCGAGGAGTGGGCGCGTTACCGGCAACTGATGCAGGGGCCGCTCGGGGTCTATTCGCCCCAGCTCGAT
CCGCTCACGGCGCTGGGCATCGAGGCACGTAGCGAGGAGGAGCGCAGGCGCTACGCGGAGTTGCAGGTGCAGGCCGAGGC
CCGGCGCGTCGGCAAGACGCTGGCCTACCAGCGCGCCTACGACGCGGCGTGGCAGCGCCTGTTTCCCGGCCAGCCGCGCG
TGAGCCTGCCCGGCGCCAAGGCGCAGGGTGCCGGCAACACCGGCTCCGGCCGCCTGGCAGTTTTCGTCAAGGCCGACTGC
GCACCGTGCGCGCAGCGCGTGCAGCAGTTGCAGGCGGCCGGCACGGCCTTCGACCTCTATATGGTCGGCAGCCGTCAGGA
CGACGCGCGCATCCGGCAGTGGGCCACCCAGGCGGGCATCGACCCGGCCAGGGTGCGCGCCCGCACCATCACGCTCAACC
ACGATGCCGGGCGCTGGCTGTCGCTCGGCCTGCCCGGCGATCTGCCGGCCGTGGTGCGCGAGGTGAACGGCCAATGGCAG
CGGCAATAG

Protein sequence :
MNLRSLLAAVVLFAAFAAFGASAQPAPVTNSRMVPAQVQPGADAALDERQAREWGLRSEEWARYRQLMQGPLGVYSPQLD
PLTALGIEARSEEERRRYAELQVQAEARRVGKTLAYQRAYDAAWQRLFPGQPRVSLPGAKAQGAGNTGSGRLAVFVKADC
APCAQRVQQLQAAGTAFDLYMVGSRQDDARIRQWATQAGIDPARVRARTITLNHDAGRWLSLGLPGDLPAVVREVNGQWQ
RQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-65 71
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-51 66
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 8e-54 65
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-52 61
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-51 60
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 2e-51 55
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 5e-29 47
api24 CAF28498.1 conserved hypothetical protein Not tested YAPI Protein 2e-31 46
YpsIP31758_3721 YP_001402675.1 hypothetical protein Not tested YAPI Protein 4e-31 46
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 8e-30 45
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 2e-31 42
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 2e-31 42