Gene Information

Name : BN117_0539 (BN117_0539)
Accession : YP_006894588.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 580466 - 581215 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGATCCGGCCGTCGCGGCCCAGCGCCAGCAGCAACGACAGCAGGGCCTGATTGCCGGCCTGGTCACGCTGCCGTT
CCGCTTCTTCGGCGTGCTGTGCGGCGCGCTGCTGCTGTGCATCCTGATCGAATGCGTCGGCATGCACTTCTTCTGGCCCG
ATCAGGGCTGGCGCCACGCGCAGGGCATGCTGCATTACGAGCTGGATCAGCTCTCCACGCATTTCACGCGCAGCGCGCTG
GTGCAGGAGCCGGGGCGCACCGCGCACCGGCTGGTCGAGCAGGGCTACGACTGGCTGTTCGTGAAAAGCGGTCTGCTGGA
CTGGATACGCGACGCCTCGGCGCAGGCCAGCGCCGGCAGCCATCGCCCGACCAAGGACTTCCGCTACTACATCGGCTTGG
TCTACGTGAACGTGGAGAGCTACCTGATCGCGGCGGCCTATACGACGCTGGTCTTTCTCGTGCGGCTGCTGGTGCTGTGC
CTGACCCTGCCGCTGTTCCTGATGGCCGCCTTCGTCGGACTGGTGGACGGCCTGGTGCGCCGGGACATCCGCCGCTTCGG
CGCGGGACGCGAATCGGGGTTCATCTATCACCGCGCTAGGGCCAGCCTGATTCCGCTGGCCGTACTGCCTTGGGTGACTT
ACCTGGCACTGCCGGTCAGCGTGAACCCGCTGCTGATCCTGCTGCCCAGCGCCGCATTGCTCGGCGTGGCGGTGTGCATT
GCGGCGGCGACGTTCAAGAAGTATCTGTAG

Protein sequence :
MSDPAVAAQRQQQRQQGLIAGLVTLPFRFFGVLCGALLLCILIECVGMHFFWPDQGWRHAQGMLHYELDQLSTHFTRSAL
VQEPGRTAHRLVEQGYDWLFVKSGLLDWIRDASAQASAGSHRPTKDFRYYIGLVYVNVESYLIAAAYTTLVFLVRLLVLC
LTLPLFLMAAFVGLVDGLVRRDIRRFGAGRESGFIYHRARASLIPLAVLPWVTYLALPVSVNPLLILLPSAALLGVAVCI
AAATFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-71 76
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-69 70
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-44 58
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 3e-49 56
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-49 56
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-49 56
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 2e-45 56
STY4563 NP_458649.1 putative membrane protein Not tested SPI-7 Protein 5e-21 42
t4261 NP_807859.1 hypothetical protein Not tested SPI-7 Protein 5e-21 42
PMI2587 YP_002152306.1 hypothetical protein Not tested Not named Protein 1e-21 42
YE3492 YP_001007650.1 putative inner membrane protein Not tested YAPI Protein 4e-23 42