Gene Information

Name : BN117_0521 (BN117_0521)
Accession : YP_006894571.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : secreted protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 550193 - 551344 bp
Length : 1152 bp
Strand : -
Note : -

DNA sequence :
TTGGATCGTCACGCTCGACGTGAGCGCGGACGAATACTACGGCTCCGAGCAGGTCAAGCGCGCCCTGGTGCGCTACCCCA
TCAAGGTCGTCCGGCTGGACATCGACCCCGAGCACAACCCCTTTGGCCTGGCGCTGGACTGCTACGCCAGCGCACCCCAG
CGCATCGAAACGCCGCCGACGCCTACCCAGGCCGGCGCGCCCGCCAACGCCTCCAGCCACCTGCAGGGAGACTCTCCATG
AAGCCCGTTGCCTTGTCGGCCCTGGCCGGCGTCCTGCTGACCCTCGGTTTCGTGCCGGCCAGCCAGGCCGTCGAAATCCT
GCGCTGGGAGCGGCTGCCCCTGCCGGTGCCGCTGGTGGTCGGCCAGGAGCGCGTGGTCTTCATCGACCGCAATGTGCGCG
TCGGCGTACCGGCCAGCGTCGGCGACCACCTGCGCGTGCAGAGTGCGGGCGGCGCGATCTATCTGCGGGCGAGCGAGTCG
ATTCCGCCCACGCGGCTGCAACTGCAGGACGTGGAATCCGGCGCGCTGATCCTGCTCGACATCGCCGCCGAGCCGGCGAA
GGACGGCCAGGCGCCGCTGGAGCCGGTGCGCATCGTGGATGCGGAAGCCCCCGCCAAGCGCTACGGCGGCGGTGCAGCAA
GCGGCGCGGACGAGCAGGCCGATGCGCCCGCGGGCAAATCCGTTCCCCGGCGCGAAACGCCGGTACCGGTCGTGCTGACG
CGCCATGCCGCACAGAACCTGTACGCGCCGCTGCGCACCGTCGAGCCGGTCGCCGGCATCGGGCGCGTAAACCTGCGCCG
CGGCCTCGCGCTGGACACCTTGCTGCCGACGTTGCCGGTGCACGCGCGGGCACTGGCCGCGTGGCGCCTGGAAGACCAGT
GGGTGACGGCCGTGCGACTCACCAATACCTCGGCGCGCTGGCTCGACCTCGACCCGCGCGCCCTGCAGGGGAACTTCGTG
GCGGCGACCTTCCAGCATCCGAACCTGGGGCCGGCCGGCACCGCGTCCGACACCACGGTGCTCTACCTGGTCACGCGCGG
CCACGGCCTGGCCGAGTCGCTGCTGCCGGCGCTGAGCCCGATCGACGCCAGCGTGAACCTGCCGCCGGCCGCCGCGGCCG
GCTCGACCGGAGGAGCGCGCGATGAAAAGTAA

Protein sequence :
MDRHARRERGRILRLRAGQARPGALPHQGRPAGHRPRAQPLWPGAGLLRQRTPAHRNAADAYPGRRARQRLQPPAGRLSM
KPVALSALAGVLLTLGFVPASQAVEILRWERLPLPVPLVVGQERVVFIDRNVRVGVPASVGDHLRVQSAGGAIYLRASES
IPPTRLQLQDVESGALILLDIAAEPAKDGQAPLEPVRIVDAEAPAKRYGGGAASGADEQADAPAGKSVPRRETPVPVVLT
RHAAQNLYAPLRTVEPVAGIGRVNLRRGLALDTLLPTLPVHARALAAWRLEDQWVTAVRLTNTSARWLDLDPRALQGNFV
AATFQHPNLGPAGTASDTTVLYLVTRGHGLAESLLPALSPIDASVNLPPAAAAGSTGGARDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-75 68
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-75 63
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-75 62
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-74 62
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-75 56
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 1e-55 49
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-51 45