Gene Information

Name : BN117_0519 (BN117_0519)
Accession : YP_006894569.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 548355 - 548789 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGCCTCGGATCTGGATTGACGCGGCCGCCGTGCTGCTGGCGGCCACCCTGCTCGGCGGCTGCGCCACCAGCAAGGAGAA
GCTGCTACCGCACGGCGACAGCACCATGCTCGACATCTGGCATCAGGAGACCGGCGGCAGCGCGGGCGGCGGCCAGGCCG
CGCGGCAACTGCTCGATGCGCGCCAGGGCCTGCGCCGGCCGCTGACCGAGGCCGCTGTGCAGGCGGCGCCCGGCGTGCAG
GCGCGCTACACCCGTACCGCGCAGAACGAGATTCACCGCCAGTTCCACCGCCTGCCGAACCCCGACCTGGTGATGTACGT
GTTCCCGCACCTGGCGGGCACCGACCCGGTGCCGGTGCCCGGCTACAGCACGGTATTCCCGCTCTACCAGCGCGTGCAGT
ACGCGATGCCGGGCGAGCGCGTGGAGGACTACTGA

Protein sequence :
MPRIWIDAAAVLLAATLLGGCATSKEKLLPHGDSTMLDIWHQETGGSAGGGQAARQLLDARQGLRRPLTEAAVQAAPGVQ
ARYTRTAQNEIHRQFHRLPNPDLVMYVFPHLAGTDPVPVPGYSTVFPLYQRVQYAMPGERVEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-41 79
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-40 74
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 7e-35 72
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 4e-34 69
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-35 69
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-35 67
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 3e-26 53
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 3e-18 48
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 2e-25 47
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 2e-25 47
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 9e-21 46
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 2e-21 46
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 3e-20 46