Gene Information

Name : ctaD (BN117_4274)
Accession : YP_006898000.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : cytochrome c oxidase polypeptide I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4582123 - 4583718 bp
Length : 1596 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACCATTGTCCACGATCACAGTCCTTCGGCCGGCCATGCCGACCATCACGCCGCGCCCAGCGGGTGGCGACGATG
GTTGTTCGCGACCAACCACAAGGACATCGGGACGATGTACCTGATCTTCTCGCTGGTGATGCTCATGGTGGGCGGCGTGC
TGGCGCTGGCCGTGCGTACCGAGCTGTTCGAGCCGGGCCTGCAGTTCTTCCGCCCCGAGCTGTTCAACCAGTTCACCACC
ATGCACGGCCTGATCATGATCTTCGGGGCCATCATGCCGGCGTTCGTGGGCTTCGCCAACTGGATGATCCCCTTGCAGAT
CGGCGCCTCCGACATGGCGTTCGCCCGCATGAACAACTTCAGCTTCTGGCTGCTGCCGGTGGCTTCGGTGCTCCTGCTCA
GTTCGTTCTGGGTCGACGGCGGCGCCACCGCCGCCGGCTGGACGCTGTACGCGCCGCTGTCGCTGCAGATGGGCCCGGGC
ATGGACCTGACCATTTTCGCGGTGCACATCATGGGCGCCTCGTCCATCATGGGCGCGATCAACATCATGGTGACCATCCT
CAACATGCGCGCGCCCGGCATGACGCTGATGCGCATGCCGCTGTTCTGCTGGACCTGGCTGATCACCGCGTTCCTGCTGC
TGGCCGTGATGCCGGTGCTGGCGGCGGGCATCACCATGCTGCTGGCCGACCGCCATTTCGGCACCGGCTTCTTCAACGCG
GCGGCGGGCGGCGACCCGGTGATGTACCAGCACGTGTTCTGGTTCTTCGGGCATCCCGAGGTCTACATCATGATCCTGCC
GGCCTTCGGCATCGTATCGGCTGTGGTGCCGGCGTTCTCGCGCAAGAAGCTGTTCGGCTATGCACCCATGGTGTACGCCA
CGGCGTCGATCGCGGTGCTGTCGTTCCTGGTGTGGGCGCACCACATGTTCACCACGGGCATCCCGGTGGTCGGCCAGCTG
TTCTTCATGTACGCCACCATGCTGATCTCGATCCCGACCGGCGTGAAGGTGTTCAATTGGGTGGCCACCATGTGGCGCGG
CTCGCTCAGTTTCGAGACGCCGATGCTGTTCGCGGTGGGTTTCATCTTCGTGTTCACGGTCGGCGGCTTCACCGGCCTCA
TCCTGGCGGTGGCGCCGATCGACATCCAGGTGCACGACACCTACTACGTGGTGGCGCACTTCCACTACGTGCTGGTGGCG
GGCTCGCTGTTCGCGCTGTTCGCCGGCGCGTATTACTGGCTGCCCAAATGGACCGGCCGCATGTACGACGAGAAGCTGGG
CAAGCTGCACTTCTGGTCCACCATGATCTCGTTCAACGTGACCTTCTTCCCGATGCACTTCCTGGGCCTGGCCGGCATGC
CGCGCCGCTACGCCGACTACGCCGCGCAGTTCACCACCTTCCACCAGGTGGCCACCATCGGCGCGATCTGGTTCGGCCTG
TCGCAGTTCATCTTCGTCTGGGCGGCGCTGCGCTGCTACCGCGGCAAGGGCGAGGTGGCCACGGCCAAGCCGTGGGACGG
CGCCGAGGGGCTGGAGTGGACCGTGCCGTCGCCCGCGCCGCATCATACGTTCGTGACGCCGCCCGAGGTCAAGTAG

Protein sequence :
MSTIVHDHSPSAGHADHHAAPSGWRRWLFATNHKDIGTMYLIFSLVMLMVGGVLALAVRTELFEPGLQFFRPELFNQFTT
MHGLIMIFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLPVASVLLLSSFWVDGGATAAGWTLYAPLSLQMGPG
MDLTIFAVHIMGASSIMGAINIMVTILNMRAPGMTLMRMPLFCWTWLITAFLLLAVMPVLAAGITMLLADRHFGTGFFNA
AAGGDPVMYQHVFWFFGHPEVYIMILPAFGIVSAVVPAFSRKKLFGYAPMVYATASIAVLSFLVWAHHMFTTGIPVVGQL
FFMYATMLISIPTGVKVFNWVATMWRGSLSFETPMLFAVGFIFVFTVGGFTGLILAVAPIDIQVHDTYYVVAHFHYVLVA
GSLFALFAGAYYWLPKWTGRMYDEKLGKLHFWSTMISFNVTFFPMHFLGLAGMPRRYADYAAQFTTFHQVATIGAIWFGL
SQFIFVWAALRCYRGKGEVATAKPWDGAEGLEWTVPSPAPHHTFVTPPEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 5e-96 49