Gene Information

Name : BN117_4230 (BN117_4230)
Accession : YP_006897959.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4541913 - 4542677 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGATCGACCACTTGTCTCCCAACAAAGTCATGATCGTCACGGGCGCGGCGCGCGGCATCGGCGCCGCCGTGGCGCTGCT
GGCGGCGCGCCGCGGCTACGCCGTCTGCGTCAACTACCGGTCGCGCGGCGACGCCGCCGAGCAGGTGGTGCAGGCCATCC
GCGACGAAGGCGGACGAGCCCTGGCCGTGGCCGCCGACGTGGCCGACGAGGCCCAGGTCGTGCGGATGTTCGAAACCGTC
GACCGCGAGCTGGGCCGGGTCGACGCGCTGGTCAACAATGCCGGCATCCTCGAGGCGCAGATGCGCGTCGAGGAGATGGA
CGCGGCCCGCATCACTCGCATACTCGCCACCAACGTGGTGGGCGCCTTCGTCTGTTGCCGCGAAGCCGTGCGCCGCATGG
CGCCGCGCCATGGCGGACGCGGCGGCGCCATCGTCAACGTGTCTTCGGTGGCCGCGCGGCTGGGCTCGCCGGGCGAGTAT
GTCGATTACGCCGCCTCCAAGGGCGCGCTGGATACGCTGACCATCGGCCTGTCGCGCGAGGTGGCCGCCGACGAGATCCG
CGTCAACGCGGTGCGTCCGGGCACCATCTACACCGATATGCACGCCAGCGGCGGCGAGCCGGGGCGCGTCGACCGGCTCA
AGGACGGCATTCCGTTGCGGCGCGGCGGCACCGTGCAGGAAGTGGCCGGCGCGGTGATGTGGTTTTTTTCCGATGAGGCC
GGCTACACGACCGGGTCGTTCATCGAGGTTTCAGGCGGCAAATGA

Protein sequence :
MIDHLSPNKVMIVTGAARGIGAAVALLAARRGYAVCVNYRSRGDAAEQVVQAIRDEGGRALAVAADVADEAQVVRMFETV
DRELGRVDALVNNAGILEAQMRVEEMDAARITRILATNVVGAFVCCREAVRRMAPRHGGRGGAIVNVSSVAARLGSPGEY
VDYAASKGALDTLTIGLSREVAADEIRVNAVRPGTIYTDMHASGGEPGRVDRLKDGIPLRRGGTVQEVAGAVMWFFSDEA
GYTTGSFIEVSGGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 5e-57 61
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 1e-56 60