Gene Information

Name : BN117_3945 (BN117_3945)
Accession : YP_006897695.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4240457 - 4241581 bp
Length : 1125 bp
Strand : -
Note : -

DNA sequence :
ATGCGGCGCGCCCTGGCACTGGCGCGTTCGGTCATGTACAGCACGGCCCCCAATCCGCGCGTGGGCTGCGTCATCGTGCG
CGACGGGCAGGTGCTGGGCGAGGGCGCCACGCAGCCGCCAGGCGGTCCGCACGCCGAGGTGTGCGCGCTGCGCGAGGCCG
CCGCGCGCGGCGCTTCGCTGGCCGGCGCCACCGTGTACGTGACGCTGGAGCCATGCAGCCATTTCGGCCGCACGCCGCCG
TGCGTCGATGCCCTGGCGGCGGCGGCGCCGGCGCGCGTGGTGGTCGCCATGGGAGACCCCAATCCGCGCGTCAACGGCCA
GGGCCTGGCGCGGCTGCGCGCCGCCGGCATCGCGGTGACCGAGGACGTGTGCCGCGACGAGGCGCTGGAACTGAACGCGG
GCTTCGCGGCGCGCATGAGCCGCGGCCTGCCGTGGGTCTGGCTGAAGCTGGCCGCCTCGCTGGACGGGCGCAGCGCCCTG
CACAACGGCGTGTCGCAGTGGATCACCGGCGAAGCCGCGCGCGCCGATGGCCACCACTGGCGCGCCCGCAGCGGCGTGGT
GCTGACCGGCATGGGCACGGTGCTCAAGGACGATCCGCAATTGAATGCGCGCGCGGTGCAGACCAGCCATCCGCCGCGCA
AGGCGGTCATCGATGGCCGCTTCGAAATCCCCGAGGACGCGCGCCTGTTCGACGACGGGGCGCAAGTGCTGGTTTTCACG
GCCCGCTCCGATGCGGCCAAGGCGCGCCGCATGGCCGACCGCAACGCGCGCGTGATCGAACTGCCGGGCGTGCGCCCGGA
CCGCGTCGACCTGCCCGCCGTGATGCGTTGGCTGGCCAGCCAGGAAATCAACGAAGTGCACGTGGAAGCGGGGGCCGGAT
TGTCAGGCGCGCTGCTTGCTGAGGATTGCGTGGACGAGTTGCTGGTGTATCTGGCGCCCGTCCTGCTGGGCGACGCGGCG
GGCATGGTACGACTGCCCTTGCTCGAACATCTCGATGGGGCGCGCCGCTTCGAATTCGCCGAACTGGCTCCGGTAGGCAC
CGATGTGCGCCTGCGAGCCCGGGTGGCGTCGCGCTGGCGCGCGCTGCAAGACAGCGTGAGCGCCGCGTCGCGACAGCGCG
GATAA

Protein sequence :
MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASLAGATVYVTLEPCSHFGRTPP
CVDALAAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVTEDVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSAL
HNGVSQWITGEAARADGHHWRARSGVVLTGMGTVLKDDPQLNARAVQTSHPPRKAVIDGRFEIPEDARLFDDGAQVLVFT
ARSDAAKARRMADRNARVIELPGVRPDRVDLPAVMRWLASQEINEVHVEAGAGLSGALLAEDCVDELLVYLAPVLLGDAA
GMVRLPLLEHLDGARRFEFAELAPVGTDVRLRARVASRWRALQDSVSAASRQRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-50 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-50 43