Gene Information

Name : ureC (BN117_3929)
Accession : YP_006897681.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4223570 - 4225285 bp
Length : 1716 bp
Strand : -
Note : -

DNA sequence :
ATGACCAGGATTTCGCGTTCGGCATATGCCGAGATTTACGGGCCGACCGTGGTCGGCGGCGTCGGCGACCGGGTGCGCCT
GGCCGACACGCTGCTGCTGGCCGAGGTCGAGAAGGACCACACCATCTTCGGCGAGGAGGTGAAGTTCGGCGGCGGCAAGG
TCATCCGCGACGGCATGGGGCAGAGCCAGCGCCTGGCCACCGATTGCGTCGACACGGTGATCACCAACGCGCTGATCATC
GACGCGGTGACCGGCATCGTCAAGGCCGACATCGGCATCAAGGACGGGCTGATCAGCGGCATCGGCAAGGCGGGCAACCC
GGACACCCAGCCGGGCGTGACCATCATCATCGGCGCTTCGACCGAGGTGGTGGCCGGCGAGGGGCTGATCGTGACGGCCG
GCGCCATCGATACGCATATCCACTTCATCTGTCCGCAGCAGATCGAGGAGGCCCTGGCCACCGGCACGACCACCATGATA
GGCGGCGGCACCGGGCCGGCCACCGGATCGCTGGCCACCACCAGCACCTCGGGCCCCTGGCATATGGCCGCCATGCTGCA
GGCGCTGGACGCCTTTCCGGTGAACGTGGGCCTGTTCGGCAAGGGCAGTTCGAGCTCGCACGGCGCGCTGCTGGAACAGG
TGCGGGCCGGCGCCATGGGCCTGAAGATCCACGAGGACTGGGCCAGCACGCCGGCTTCCATCGATACCTGCCTGAACGTG
GCCGAGGAAACCGACATCCAGGTCGCGATCCACAGCGACACGCTCAACGAGTCGGGCTTCGTGGAGGACACGTTCGCCGC
GTTCAAGGGCCGCACCATCCATTCCTTCCATACGGAAGGCGCCGGCGGCGGCCACGCGCCGGACATCATCCGGGCCGCCG
GCATGCCCAACGTGCTGCCGGCCTCGACCAACCCGACCATGCCGTTCACGCGCAACACGATCGACGAGCACCTGGACATG
GTCATGGTATGCCATCACCTGGATCCATCCATCGCCGAGGACCTGGCTTTCGCCGAAAGCCGGATCCGGCGCGAGACCAT
CGCGGCCGAGGACATCCTGCACGACCTGGGGGCGTTTTCCATCATGAGCTCGGACTCGCAGGCCATGGGGCGCGTGGGCG
AGATCGTCCTGCGCACCTGGCAGACCGCGCACAAGATGAAGCTGCAGCGCGGCCCGCTGCAAGGCGACAGCGAGCGCTCG
GACAATGAGCGCATCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCCGTGGCGCATGGCATCGCGCACCTGGTGGG
CTCGGTGGAAGTGGGCAAGCTGGCCGACCTGGTGCTGTGGAAGCCCGCCTTTTTCGGCGTCAAGGTCAACATGGTGCTCA
AGAGCGGCATGGCCGTCAGCGCCAGCATCGGCGACATGGGCGCCTCGATCTCGACGCCGCAGCCGGTGCAGATCCGCCCC
ATGTGGGGCAGCCACGGCAAGGCGCTGCGCACCTCGGTGGCCTTCGTCTCGCAGGTCAGCCTGAGCAATCCGGCGGTCAG
CGAACTGGGGCTGAACAAGCGCCTGGAGGCGGTGCGCGGATGCCGCGGCGTGACCAAGCACGACATGGTGCGCAACAACT
GGCTGCCGGCGATCTCGGTCGACCCGCAGACCTACCAAGTCTATGCCGATGGGCAATTGCTCAGATGCGAGGCGCTTGCC
GAGCTGCCCATGGCGCAACGCTATTTCCTGTTCTGA

Protein sequence :
MTRISRSAYAEIYGPTVVGGVGDRVRLADTLLLAEVEKDHTIFGEEVKFGGGKVIRDGMGQSQRLATDCVDTVITNALII
DAVTGIVKADIGIKDGLISGIGKAGNPDTQPGVTIIIGASTEVVAGEGLIVTAGAIDTHIHFICPQQIEEALATGTTTMI
GGGTGPATGSLATTSTSGPWHMAAMLQALDAFPVNVGLFGKGSSSSHGALLEQVRAGAMGLKIHEDWASTPASIDTCLNV
AEETDIQVAIHSDTLNESGFVEDTFAAFKGRTIHSFHTEGAGGGHAPDIIRAAGMPNVLPASTNPTMPFTRNTIDEHLDM
VMVCHHLDPSIAEDLAFAESRIRRETIAAEDILHDLGAFSIMSSDSQAMGRVGEIVLRTWQTAHKMKLQRGPLQGDSERS
DNERIKRYIAKYTINPAVAHGIAHLVGSVEVGKLADLVLWKPAFFGVKVNMVLKSGMAVSASIGDMGASISTPQPVQIRP
MWGSHGKALRTSVAFVSQVSLSNPAVSELGLNKRLEAVRGCRGVTKHDMVRNNWLPAISVDPQTYQVYADGQLLRCEALA
ELPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-170 67
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-170 67
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-158 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-158 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-158 61
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-158 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_006897681.1 urease subunit alpha VFG0270 Protein 2e-143 59