Gene Information

Name : arsB (BN117_3682)
Accession : YP_006897459.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3961077 - 3962357 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence :
ATGATCACCGCCGCCGTCATTTTCCTGTTCACCCTGACGCTGGTGATCTGGCAGCCGCGCGGGCTGGGCATAGGCTGGAG
TGCCTACCTGGGCGCGGCCATTTCGCTGGCCACCGGCGTGGTGCACTGGAGCGACATCCCCGTTGTGTGGGGCATCGTCT
GGAATGCCACCGCCGCCTTCATCGCCATCATCATCGTCAGCCTGCTGCTGGACGAAGCGGGCTTTTTCGAATGGGCCGCG
CTGCACGTGGCGCGCTGGGGCCGCGGGCGCGGCCGCATGCTGTTCGCCTGGATCGTGCTGCTGGGCGCGGCCGTCTCGGC
GCTGTTCGCCAACGACGGCGCCGCGCTCATCCTCACGCCCATCGTCATGGCCATGCTGGCCGCGCTGGGCTTTGGCGCCG
GCGCCACGCTGGCCTTCGTCATGGCCGCCGGCTTCGTCGCCGACACCGCCAGCCTGCCGCTGATCGTCTCCAACCTGGTC
AACATCGTCTCGGCAGACTACTTCGGCATCGGTTTCAACCGCTATGCCGCGGTGATGATTCCCGTGACGCTGGTGTCGGT
GGCCGCCACGCTGGCCGTGCTGCTGCTGCGCTTTGGCGCCAGCGTGCCGGCGCGCTACGACGCCTCGCAGCTGAAAGCGC
CGCGCGCGGCCATCCGCGACCCGCGCACCTTCCGCGCCGGCTGGATGGTGCTGGCCCTGCTGCTGGTGGGGTTCTTCGGC
CTGGAGCCGCTGGGCGTGCCGGTCAGCGCCACCGCGGCGGCGGCCGCCGCCGTGCTGCTGGCCGTGGCCGGGCGCGGCCA
TTTCATCAGCACGCGCAAGGTCATGCGCGAAGCGCCCTGGCACATCGTGGTGTTCTCGCTCGGCATGTACCTGGTGGTGT
TCGGCCTGCGCAATGCCGGCCTTACCCAGTCGCTGGCCGACCTGTTCGGCTGGTTCGCCTCGCACGGCCTGTGGGCCGCC
ACCTACGGCGTGGGCCTGGTCACCGCCTTGCTGTCTTCGGTGATGAACAACCTGCCCACCGTGCTGGTGGGCGCCCTGTC
GATCGACGCCAGCAGCGCCAGCGGCGCGGCGCGCGAGGCCATGGTGTACGCCAACGTCATCGGCAGCGACCTCGGCCCCA
AGATCACGCCCATCGGCAGCCTGGCAACCTTGCTGTGGCTGCACGTGCTGGCGCGCAAGGGCGTGCGCATCTCGTGGGGC
TATTACTTCAAGGTCGGCATCGTGCTGACCCTGCCGGTGCTGCTGCTCACGCTGGGCGCGCTGGCGCTGCGGCTGTCGTA
A

Protein sequence :
MITAAVIFLFTLTLVIWQPRGLGIGWSAYLGAAISLATGVVHWSDIPVVWGIVWNATAAFIAIIIVSLLLDEAGFFEWAA
LHVARWGRGRGRMLFAWIVLLGAAVSALFANDGAALILTPIVMAMLAALGFGAGATLAFVMAAGFVADTASLPLIVSNLV
NIVSADYFGIGFNRYAAVMIPVTLVSVAATLAVLLLRFGASVPARYDASQLKAPRAAIRDPRTFRAGWMVLALLLVGFFG
LEPLGVPVSATAAAAAAVLLAVAGRGHFISTRKVMREAPWHIVVFSLGMYLVVFGLRNAGLTQSLADLFGWFASHGLWAA
TYGVGLVTALLSSVMNNLPTVLVGALSIDASSASGAAREAMVYANVIGSDLGPKITPIGSLATLLWLHVLARKGVRISWG
YYFKVGIVLTLPVLLLTLGALALRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 9e-116 71
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-89 57
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-90 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-89 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_006897459.1 arsenical pump membrane protein BAC0577 Protein 3e-114 72
arsB YP_006897459.1 arsenical pump membrane protein BAC0578 Protein 2e-114 72
arsB YP_006897459.1 arsenical pump membrane protein BAC0031 Protein 2e-115 71
arsB YP_006897459.1 arsenical pump membrane protein BAC0576 Protein 3e-115 71
arsB YP_006897459.1 arsenical pump membrane protein BAC0574 Protein 4e-90 57
arsB YP_006897459.1 arsenical pump membrane protein BAC0575 Protein 1e-90 56