Gene Information

Name : tktA (BN117_3488)
Accession : YP_006897284.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3764691 - 3766727 bp
Length : 2037 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAACCCGACCGCCCCTAAACTTGCCTTGGCGGATGCCATCCGCGTACTTGCGATGGACGCCGTGCAGAAAGCGAA
TTCCGGACACCCCGGCGCGCCCATGGGAATGGCCGAAATCGCGCAAGCGCTGTGGCTGGGCAACCTGCGCCACAACCCGG
CCGATCCGGCCTGGGCCAACCGCGACCGCTTCGTGCTGTCCAATGGCCACGGCTCGATGCTGATCTACGCCCTGCTGCAC
CTGACGGGCTACGATCTGCCCCTGGAAGAGCTGAAGAACTTCCGCCAGCTGCATTCGCGCACGCCGGGGCACCCCGAAGT
GGGCATCACCCCGGGCGTGGAAACCACCACCGGCCCGCTGGGCCAGGGCCTGGCCAACGCGGTCGGCATGGCGCTGGCCG
AGGCCCTGCTGGCGGCCGAATTCAACCGCGCCGGCCACACGGTGGTGGACCACCACACCTATGTCTTCCTGGGCGACGGC
TGCCTGATGGAAGGCATCTCGCACGAGGCCTGCTCGCTGGCCGGCACGCTCAAGCTGTCCAAGCTGGTGGCGCTGTACGA
CGACAACGGCATTTCCATCGACGGCCATGTCGAGCACTGGTTCGCCGACGACACGGCGACCCGCTTCGAGGGCTACGGCT
GGAACGTGATCCGCGGCGTGGACGGCCACGACGTGGCGGCGGTGGACGCGGCCATCAAGCAGGCGCGCGCGCAATCCGAG
AAACCCACCCTGATCGTCTGCCGCACCGTGATCGGCAAGGGTTCGCCCAACATGGCCGGCACGCACAATGTGCACGGCGC
GCCGCTGGGCAACGACGAGATCGCCGCCACCCGCGCGGCGCTGGGCTGGTCGGCCGGCCCCTTCGAGGTGCCGCAGGATA
TCTACGCCGCGTGGGACAGCCGTCCCGCCGGCGCGCTGGCGCAGGCCGCCTGGGAAGACAAGTTCCAGGCCTATGCGGCC
CAGTATCCGGCCGAGGCCGCCGAATTCACGCGCCGCATGAAGGGCGAGCTGCCCGAAGGCTTCGCCGCCCGGTTCGAGGC
CTTCCTGCAGGCCACCGTGGCCAAGGGCGAGACGGTCGCCACCCGCAAGGCGTCGCAGTTCGCCATCGCCGAGCTGGCCG
GCCTGCTGCCGGAGATGCTGGGCGGCTCGGCCGACCTGACCGGCTCGAACTTCACCGACTGGAAGGGCGTGGCGCCGCTG
CGCGCCGGCCATCACGGCGTGCATTTCGGCCGCCATATCAACTACGGCGTGCGCGAGTTCGGCATGGCCGCCATTATGAA
CGGCATCGCGCTGCATGGCGGCTACCTGCCGTTCGGCGGCACCTTCCTGACGTTCTCGGACTACTCGCGCAACGCCATCC
GCATGGCGGCGCTGATGAAGCAGCGCGTGGTGCACGTGTTCACGCACGATTCCATCGGCCTGGGCGAGGACGGTCCGACC
CACCAGTCGATCGAACACGCCGCCAGCCTGCGCCTGATTCCCAACCTGTCGGTGTGGCGGCCCTGCGACACCGTCGAGAC
GGCCGCCGCCTGGGGCGCTGCCGTGACGCGGCCGGCCAGCATCGGCATGGACGTGCACGACGGCGGCCCGACCGCGCTGC
TGCTGTCGCGCCAGAACCTGCCGTTCGTGGCGCGCGACGAGGCCACGCAGAAAGCGATTGTTCGCGGTGGTTACGTCTTG
CGCGACGCACACGACGCGCGTGCGGCTATCATCGCCACGGGCTCGGAAGTCGCCATCGCGCTGGCCGCGCAGGAATTGCT
GGCCGCCGACGGCATCGCCGTGCGGGTGGTTTCCATGCCCAGCACCGACGTGTTCGACCGCCAGGACGCCGAATGGAAGC
GCGAAGTGCTGCCGGCCGGCATGCCGCGCGTGGCCGTCGAGGCGGGCGTGACCGCGTTCTGGCACAAATACGTGGGCCTG
GAAGGCGCCGTGGTGGGTATCGACCGCTATGGCGAGTCGGCGCCCGCCGGGGCTTTGTTCAAATTCTTCGGACTGACCGC
TGAAAAGGTGGCCGAGGCCGTCAAGCAGGTTTTGTAA

Protein sequence :
MSNPTAPKLALADAIRVLAMDAVQKANSGHPGAPMGMAEIAQALWLGNLRHNPADPAWANRDRFVLSNGHGSMLIYALLH
LTGYDLPLEELKNFRQLHSRTPGHPEVGITPGVETTTGPLGQGLANAVGMALAEALLAAEFNRAGHTVVDHHTYVFLGDG
CLMEGISHEACSLAGTLKLSKLVALYDDNGISIDGHVEHWFADDTATRFEGYGWNVIRGVDGHDVAAVDAAIKQARAQSE
KPTLIVCRTVIGKGSPNMAGTHNVHGAPLGNDEIAATRAALGWSAGPFEVPQDIYAAWDSRPAGALAQAAWEDKFQAYAA
QYPAEAAEFTRRMKGELPEGFAARFEAFLQATVAKGETVATRKASQFAIAELAGLLPEMLGGSADLTGSNFTDWKGVAPL
RAGHHGVHFGRHINYGVREFGMAAIMNGIALHGGYLPFGGTFLTFSDYSRNAIRMAALMKQRVVHVFTHDSIGLGEDGPT
HQSIEHAASLRLIPNLSVWRPCDTVETAAAWGAAVTRPASIGMDVHDGGPTALLLSRQNLPFVARDEATQKAIVRGGYVL
RDAHDARAAIIATGSEVAIALAAQELLAADGIAVRVVSMPSTDVFDRQDAEWKREVLPAGMPRVAVEAGVTAFWHKYVGL
EGAVVGIDRYGESAPAGALFKFFGLTAEKVAEAVKQVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 61
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 5e-174 58