Gene Information

Name : BN117_3140 (BN117_3140)
Accession : YP_006896957.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3382962 - 3383816 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAACGTCATAGCCTGCATCAGCAGTCCCAGGCGCGTGCAGAGCATTTGCGACTATGCGATCTGGGCCGTGCGCCG
GCTCGGCAGCGAACTGGAGCTCCTGCACGTCGTCGAGCGCGAACAGGATGCGGTGCCCATCGCGGACCTCAGCGGCGGGA
TCTGGATGGGGGCCCAGGAAACCCTGCTCAAGGAACTGGCCGAGCTCGACGAGCGCCGCCAGCAGCTTGCCCAGGAGCAG
GGGCGCCAGCTCTTGCAGGCAGCCACCGAGCGGGCGCGCGAGGCCGGCATACAAGGGCTGGCCGGGCTGGCCCGCCAGGG
CTACCTGGTCGATGTGCTGCTGGAGCTCGAAGACGACGCGCGCCTGTTCGTGATGGGCCAGCACGACCGGCCCACCAAGC
CGTCACGCCTGCTGCCCGACCAGCACCCGGAAGCGGCGGTGCGCGCGCTGCACCGGCCCGCCCTGGTGGCCGGTCCCAGT
TTCGTCACGCCGACCCGCTTCCTGGTTGCCTTCGATGGCAGCGCCACCTCCCGCAAGACCGTGGAAATGGTCAGCCGCAG
CCCGCTGCTGCAAGGCATGCAGGCCCATGTCCTGACCGCCGGATCGGACGCCGGCGAAGCGCGCCAGGCGCTGCAATGGG
CGCGCGAACAACTGGCCCAGGGCGGTTTCGACGCCATCACGCACCATGCTGCCGAGCGGCCGGCCGATGCGCTGGCGGCC
TACGCCGGGCAGCACGGCATCGATATGCTGGTCATGGGCGCCTACGGGCATTCGCGCATCCGCCAGCTGGTGCTGGGCAG
CACCACCACGGAAATCCTGAGCCGGGTCTCGCTGGCGGTGCTGATCCTGCGCTAG

Protein sequence :
MKNVIACISSPRRVQSICDYAIWAVRRLGSELELLHVVEREQDAVPIADLSGGIWMGAQETLLKELAELDERRQQLAQEQ
GRQLLQAATERAREAGIQGLAGLARQGYLVDVLLELEDDARLFVMGQHDRPTKPSRLLPDQHPEAAVRALHRPALVAGPS
FVTPTRFLVAFDGSATSRKTVEMVSRSPLLQGMQAHVLTAGSDAGEARQALQWAREQLAQGGFDAITHHAAERPADALAA
YAGQHGIDMLVMGAYGHSRIRQLVLGSTTTEILSRVSLAVLILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
uspA AFV47994.1 universal stress protein A Virulence delta-AbaR25 Protein 5e-47 41
ABTW07_3909 YP_005797157.1 universal stress protein Not tested AbaR4e Protein 7e-47 41
ABK1_0239 YP_005512811.1 Universal stress protein Not tested AbaR4d Protein 7e-47 41
uspA AEO37451.1 universal stress protein A Not tested AbaR4 Protein 7e-47 41
BJAB07104_00258 YP_008207723.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 7e-47 41
uspA AEQ20902.1 universal stress protein A Not tested Tn6166 Protein 7e-47 41
BJAB07104_00274 YP_008207739.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 7e-47 41
uspA AEZ06029.1 universal stress protein A Not tested Tn6167 Protein 7e-47 41
BJAB0868_00262 YP_008211588.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 7e-47 41
uspA AFH57199.1 universal stress protein Virulence AbaR4a Protein 5e-47 41
BJAB0868_00278 YP_008211604.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 7e-47 41
uspA AFV47946.1 universal stress protein A Virulence AbaR25 Protein 5e-47 41
ABZJ_00238 YP_005524194.1 Universal stress protein Not tested AbaR22 Protein 7e-47 41
uspA AFV47966.1 universal stress protein A Virulence AbaR25 Protein 5e-47 41
ABZJ_00257 YP_005524213.1 Universal stress protein Not tested AbaR22 Protein 7e-47 41
uspA AFV47977.1 universal stress protein A Virulence delta-AbaR25 Protein 5e-47 41
ABTW07_3868 YP_005797116.1 universal stress protein Not tested AbaR4e Protein 7e-47 41