Gene Information

Name : BN117_2934 (BN117_2934)
Accession : YP_006896768.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3160963 - 3161634 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGACTCATTTGCTATTGGTGGAAGACGACCCGATGCTGGGCGACGCGCTGCAGACCGCGCTGCAGCGCGAACTCGGCGC
CCGGGTCGATTGGGTGCGCGACGGCGCGCAGGCGCAGCTTGCGCTGGTCGACCACGCCTACCAGCTGATCCTGCTGGACA
TAGGCCTGCCCGGCCAGTCCGGCTTGGCGCTGCTGCGCGCGCTGCGCGAGGGCTACGACACCACCCCGGTGCTGCTGGTG
ACCGCGCGCGACCAGCTCAGCGACCGCATCCGCGGCCTGGACGGCGGCGCCGACGACTACATCGTCAAGCCGTTCGAACT
GGACGAACTGCTGGCGCGCCTGCGCGCCGTGCTGCGCCGCAGCCACAACCAGGTGGCGCCGCTCATGCGGCATGGCGAGC
TGCTGGTGGACCCGGCGGCGCGCCAGGTGTCGCGCGCGGGCAGGCCCGTCGCGCTCAGCCAGAGCGAATACCGCACGCTG
CTGGCGCTGATGCAGCGGCGCGGCCGCACGGTCTCGCGCGAGCAGCTGGAGCACGATGTCTACAGCGCCAGCGTGGCGCT
GGAAAGCAACACGGTCGCCGTGTACGTGCACCAGTTGCGGCGCAAGCTGGGCGACGACCTGATCGAGACGGTGCACGGCT
ACGGCTATCGCATCGGCCAGGAAGGCGCATGA

Protein sequence : 
MTHLLLVEDDPMLGDALQTALQRELGARVDWVRDGAQAQLALVDHAYQLILLDIGLPGQSGLALLRALREGYDTTPVLLV
TARDQLSDRIRGLDGGADDYIVKPFELDELLARLRAVLRRSHNQVAPLMRHGELLVDPAARQVSRAGRPVALSQSEYRTL
LALMQRRGRTVSREQLEHDVYSASVALESNTVAVYVHQLRRKLGDDLIETVHGYGYRIGQEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_2934 YP_006896768.1 two-component response regulator BAC0487 Protein 1e-24 43
BN117_2934 YP_006896768.1 two-component response regulator NC_002516.2.879194.p Protein 1e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_2934 YP_006896768.1 two-component response regulator VFG0473 Protein 2e-27 45
BN117_2934 YP_006896768.1 two-component response regulator VFG0596 Protein 3e-25 42