Gene Information

Name : wbpO (BN117_2659)
Accession : YP_006896513.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2853984 - 2855273 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGAAGAAGTTTTCCAATCCTGCAGATGTTCATCTCGCCGTTGTCGGCCTCGGATACGTGGGGCTGCCGCTGGCCGT
GGAGTTCGGCAAGAAGCGCCCGGTGATCGGCTTCGATATCAACGAGCGCCGCATCGCCGCGCTCAAGGCCGGCCACGATC
ACACCCTGGAAGTCGAGGACGACGAACTGGCCCGGGCCGCGCAGCTCAGCTACACGGCCGAGCGCGCTGACCTGGCCCAG
GCCAATGTGTTCATCGTTACCGTGCCCACGCCGATCGACGAGTACAAGCAGCCCGACCTCACGCCGCTGGTCAAGGCCAG
CGAGACCATCGGCGCGGTGCTCAAGCGCGGCGACATCGTGATCTACGAATCGACCGTGTACCCGGGCGCCACCGAGGAAG
ACTGCGTGCCGGTGCTCGAGCGCGTGTCGGGCCTGAAGTTCAACCAGGACTTCTACGCCGGCTACAGCCCCGAGCGCATC
AACCCGGGCGACAAGGCGCACCGCGTCAACACCATCAAGAAGGTGACCTCGGGCTCGACGCCGGAAGTCGCCGAGCTGGT
TGACCAGCTGTACAACGAGATCATCACGGCCGGTACCCACAAGGCCTCGAGCATCCGCGTGGCCGAGGCCGCCAAGGTGA
TCGAGAACACGCAGCGCGACGTCAACATCGCGCTGATCAACGAGCTGGCGCTGATCTTCAACAAGATGGGCATCGACACC
GAGGCCGTGCTGCAGGCCGCCGGCACCAAGTGGAACTTCCTGCCGTTCCGTCCGGGCCTGGTGGGCGGGCACTGCATCGG
CGTGGATCCGTACTACCTGACGCACAAGGCGCAGTCGATCGGCTACCACCCCGAGATCATCCTGGCGGGCCGCCGCCTGA
ACGACTCGATGGGCGGCTACGTGGTCTCGCAGCTGGTCAAGGCCATGGCCAAGCGCCGCATCCACGTCGAGGGCGCGCGC
GTGCTGCTGATGGGCCTGACGTTCAAGGAAAACTGCCCCGACCTGCGCAACACGCGCGTGGTGGACATCGTGCGCGAGCT
GGGCGAGTACCACGTCGACGTGGACGTGTACGACCCGTGGGTGGACCCGGCCGAGGCCGAGCACGAGTACGGCATCACGC
CGGTGGCCAAGCCGGCCGCCGGGGAGTACGACGCGGTCATCCTGGCGGTGTCGCACCACCAGTTCGTCGAGATGGGCGCC
GAGGCGATCCGCAAGTTCGGCAAGGCCGAGCACATCCTGTACGACCTGAAGTATGTGCTGGCCCCCGACCAGGCCGACCT
GAGGCTGTAA

Protein sequence : 
MPKKFSNPADVHLAVVGLGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELARAAQLSYTAERADLAQ
ANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLERVSGLKFNQDFYAGYSPERI
NPGDKAHRVNTIKKVTSGSTPEVAELVDQLYNEIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDT
EAVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAKRRIHVEGAR
VLLMGLTFKENCPDLRNTRVVDIVRELGEYHVDVDVYDPWVDPAEAEHEYGITPVAKPAAGEYDAVILAVSHHQFVEMGA
EAIRKFGKAEHILYDLKYVLAPDQADLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-143 68
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-143 68
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-112 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpO YP_006896513.1 capsular polysaccharide biosynthesis protein VFG0431 Protein 5e-144 68