Gene Information

Name : BN117_2362 (BN117_2362)
Accession : YP_006896270.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Resistance
Product : membrane transport ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2550710 - 2552995 bp
Length : 2286 bp
Strand : -
Note : -

DNA sequence :
ATGCCCTCCACGACCCGCGACCTTGCCCTCGATACGCCATCTGGCCAACGCACGGACGCCCACGGCCACGACCACGCAGG
CCATGACCATGCCGGGCACGACCATGCCCACGACCATGCCCACGACCATGGCATCCCGGCCTGCTGCGGCCATGGGCACG
GCCAGCAGGTCACGCGGGTGCGCATCGGGCAGATGGACTGCCCCACCGAGGAAACGCTGATCCGCAAGAAGCTGGCCAGC
CTGCCCGAGGTGCACGAGCTCGACTTCAACCTGATGCAGCGCGTACTGACCGTGCTGCATGCCGACGGCGCGCTCGATCG
TATCGACGCGGCGATCCGCTCGCTGGGCATGACGCCCGAGCCCCTGGCCGGCGACGCCCCGGCGACCCCGGCCGGCGCGG
CCGCGCCTTCGCGCGGCTGGCGCCTGCTGGCCGCCGGCGGGGTGCTGGCGGCGCTGTCCGAGCTCGCCCACTTCACCGGC
CAGCCGGTCTATGTCGCCGCCGCCCTGGCGCTGGCGGCCATCCTGGCCTGCGGGCTGTCGACCTACCGCAAGGGCTGGAT
CGCGGTGCGCAACGGCAACCTCAACATCAATGCCCTGATGAGCATCGCCGTGACCGGCGCGATGCTCATCGGCCAATGGC
CGGAAGCGGCCATGGTGATGTTCCTGTTCAACGTGGCCGAGCTGATCGAGGCCCGCGCCCTGGACCGCGCCCGCCATGCG
GTGCGCGGCCTGCTGGACCTGGCGCCGCAGACCGCCACCGCGCGCCAGCCGGACGGCTCGTGGGCCGAGGTGCCGGCGGC
GCGACTGCGCCCGGGCGACCTGGTGCGGGTGCGCCCGGGCGAGCGCATCGCCGCCGACGGCACCATCAGCGAAGGCCATT
CCGCGATCGACCAGTCGCCCATCACCGGCGAAAGCCTGCCGGTGGAAAAAGGCCCGGACGACGACGTCTACGCCGGCACC
GTCAATGCCTCCGGGTCGTTCGACTACCGCGTCACGGCGGCGGCCGGCAATACCACGCTGGACCGCATCATCCACGCGGT
CGAACAGGCCCAGGGCGCGCGCGCCCCGACCCAGCGCTTCATCGACCGCTTCTCGCGCATCTACACGCCGGCCGTGGTCG
GGCTGGCGGTGCTGGTCGCGCTGGCGCCGCCGCTGCTGCTGGGCCACGCCTGGCTCGACTCCGTGTACCGCGCGCTGGCG
CTGCTGATCATCGCCTGCCCCTGCGCGCTGGTGATTTCCACCCCGGTCAGCGTGGTCAGCGGCCTGACCGCCGCCGCGCG
GCGCGGCATCCTGATCAAGGGCGGCGTCTACCTGGAGGAAGGACGCAAGCTGCGCTGGCTGGCGCTGGACAAGACCGGCA
CGCTGACCCAGGGCAAGCCGGTGCAGACCGACCTGGAACTGCTGCACGACGCCAGCGCGGGCGGGCGCCCGGCGCTGCGC
GCCGCGGTCAGCCTGGCGGCGCGCTCGGACCACCCCGTGTCGCGCGCGCTGGCCCAGGCCGACCACGCCCTGGACGCGCC
GCTGGACGAGGTGAACGGTTTCGCCGCCCTGCCCGGCCGCGGCGTGCAGGGCGAGATCGGCGGCGAGCGCTTCCAGCTGG
GCAACCGCCGCCTGATGCGCGAGCTGGGCGTCAGCACGCCCGATATCGAGGCCCGCATCGACGCCTATGAAGCGGCCGGC
AAGACCGCCATCGCCCTGGCCGACGGGCAGCGCGTCCTGCTGCTGGCCGCGGTGGCCGACATGCTCAAGGCCAGCAGCGC
CGCCGCCGTGGCCGACCTGCACCGGCTGGGCGTGCGCACCCTCATGCTGACCGGCGACAACACCCGCGCCGCCCAGGCGG
TGGCCGCCCAGGCCGGCATCGACGAGGCGCGCGGCGACCTGCTGCCGCAGGACAAGCTGGACGCCGTCGAGGCCAAGCTG
GATCCGGCCCTGCGCGTGGGCATGGTGGGCGACGGCATCAACGACGCGCCGGCGCTGGCGCGCGCCGACATCGGCTTCGC
CATGGGCGCGGCCGGCACCGGCACCGCCATCGAAACCGCCGACGTGGCGCTGATGGACGACGACCTGCGCAAGATCGGCA
CGTTCGTGCGCCTGTCGCGCGCCACCCACCGCATCCTGACCCAGAACATCGTCCTGGCGCTGGGCATCAAGGCGGTGTTC
CTGGTGCTGGCGATGGCCGGCCAGGCCACGCTGTGGATGGCGGTGTTCGCCGACGTCGGCGCCAGCCTGCTGGTGGTCGC
CAACGGCTTGCGGCTGCTGCGCGCGGGCAGGCACCAGGCGTCCTGA

Protein sequence :
MPSTTRDLALDTPSGQRTDAHGHDHAGHDHAGHDHAHDHAHDHGIPACCGHGHGQQVTRVRIGQMDCPTEETLIRKKLAS
LPEVHELDFNLMQRVLTVLHADGALDRIDAAIRSLGMTPEPLAGDAPATPAGAAAPSRGWRLLAAGGVLAALSELAHFTG
QPVYVAAALALAAILACGLSTYRKGWIAVRNGNLNINALMSIAVTGAMLIGQWPEAAMVMFLFNVAELIEARALDRARHA
VRGLLDLAPQTATARQPDGSWAEVPAARLRPGDLVRVRPGERIAADGTISEGHSAIDQSPITGESLPVEKGPDDDVYAGT
VNASGSFDYRVTAAAGNTTLDRIIHAVEQAQGARAPTQRFIDRFSRIYTPAVVGLAVLVALAPPLLLGHAWLDSVYRALA
LLIIACPCALVISTPVSVVSGLTAAARRGILIKGGVYLEEGRKLRWLALDKTGTLTQGKPVQTDLELLHDASAGGRPALR
AAVSLAARSDHPVSRALAQADHALDAPLDEVNGFAALPGRGVQGEIGGERFQLGNRRLMRELGVSTPDIEARIDAYEAAG
KTAIALADGQRVLLLAAVADMLKASSAAAVADLHRLGVRTLMLTGDNTRAAQAVAAQAGIDEARGDLLPQDKLDAVEAKL
DPALRVGMVGDGINDAPALARADIGFAMGAAGTGTAIETADVALMDDDLRKIGTFVRLSRATHRILTQNIVLALGIKAVF
LVLAMAGQATLWMAVFADVGASLLVVANGLRLLRAGRHQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 8e-168 64
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 9e-94 45
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 1e-93 45
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-92 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_2362 YP_006896270.1 membrane transport ATPase BAC0298 Protein 8e-165 63
BN117_2362 YP_006896270.1 membrane transport ATPase BAC0461 Protein 2e-71 43