Gene Information

Name : BN117_1954 (BN117_1954)
Accession : YP_006895897.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : two-component response regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2136975 - 2137664 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTATCCTGATAGCTGAAGACGACAGCATCCTGGCCGACGGCCTGTCCCGCTCGCTGCGGCACAACGGCTATGCGGT
CGACGCCGTGCGCGACGGACTGGCCGCCGATTCGGCGCTGGCCGTCCAGCCCTTCGACCTGCTGATCCTCGATCTCGGCC
TGCCCCACCTGCCCGGGCTGGAGGTACTGCGCAGGCTGCGCGCCCGCAACTCCGTGCTGCCGGTGCTGATCCTCACCGCC
GCCGACAGCATCGAACAGCGCGTCAAGGGCCTGGATCTCGGCGCCGACGACTACATGGCCAAGCCTTTCGCGCTGTCCGA
GCTCGAGGCCCGCGTGCGCGCCCTGACGCGGCGCGGCGCCGGCGGCGGCGCGACGATCGTGCGGCACGGCCGCCTGGTGT
TCGACCAGACGGGCCGCATCGCCACGGTCGACGACCAGACCCTGGACCTGTCCGCGCGCGAGGTCAGCCTGCTGGAGATC
CTGCTGGCGCGCAGCGGCCGCATGGTCAGCAAGACGCAACTGGTCGACCACCTTTGCGAATGGGGCGAGGAAGTCAGCAC
CAACGCCATCGAAGTCTATGTGCACCGCCTGCGCAAGAAACTCGAGCCCAGCGGCGTGAAAATCATCACCGTGCGCGGTC
TGGGCTATTGCCTCGAGCGGGACCAGGGTGCCTCGTATCTCGCCAGCTGA

Protein sequence : 
MRILIAEDDSILADGLSRSLRHNGYAVDAVRDGLAADSALAVQPFDLLILDLGLPHLPGLEVLRRLRARNSVLPVLILTA
ADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTRRGAGGGATIVRHGRLVFDQTGRIATVDDQTLDLSAREVSLLEI
LLARSGRMVSKTQLVDHLCEWGEEVSTNAIEVYVHRLRKKLEPSGVKIITVRGLGYCLERDQGASYLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-26 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_1954 YP_006895897.1 two-component response regulatory protein BAC0083 Protein 9e-24 42
BN117_1954 YP_006895897.1 two-component response regulatory protein BAC0487 Protein 4e-23 41
BN117_1954 YP_006895897.1 two-component response regulatory protein BAC0638 Protein 2e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN117_1954 YP_006895897.1 two-component response regulatory protein VFG0473 Protein 1e-27 45
BN117_1954 YP_006895897.1 two-component response regulatory protein VFG1390 Protein 6e-24 43