Gene Information

Name : glcE (BN117_1818)
Accession : YP_006895770.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : glycolate oxidase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1992694 - 1993779 bp
Length : 1086 bp
Strand : +
Note : -

DNA sequence :
GTGCGATCAGGTGATGACGGCGCGCGCCGGTCACAAGCCTCTGTTCATCGTCGGTGGCGGCACCAAAGGGTTTTACGGCA
ATCATCGTGCCGTGACGCCGCGGATGGCCACTGCCTGCTGGACATGACCCCTTATCGCGGCATCGTCAGCTACCAGCCTT
CGGAACTGGTGGTGACGGCGCGCGCGGGTACGCCGCTGGCCGAGCTCGAGGCGGCGCTGGCCGAGCACGGCCAGATGCTG
GCTTTCGAGCCGCCGCATTTCGGGCCTGGCGCGACGCTGGGCGGTTGCGTGGCCGCCGGCCTGTCCGGGCCGCGCCGCAT
GGCCGCCGGCGCCGTGCGCGATTTCGTGCTGGGCGCGCGCCTGCTGGATTCGCAGGGCCATATCCTGGCGTTTGGCGGGG
AAGTCATGAAGAACGTGGCCGGCTATGACGTCTCGCGGCTGCAGGCCGGCGCGCAAGGGATTTTCGGCGCCTTGCTGGAA
GTCTCGCTGAAAGTCGTGCCCCGGCCGGCCGTGGTGGAGTCGTTGCGGTTGCCCGCCACGCAGGACGAGGCTCTGCGCTG
GTTCGGACAATGGCGCGGGCGGCCGCTGCCGATCTCGGCCAGTTGCTGGACGGCCGATGGCGCGGCCGACGGCGGCGGCG
CGGTGGTGCTGCGGCTGGCCGGCGCGCCGCCGGCGGTGCAGGCGGCCCGCGAAGTCCTGGGCGGAGAACTGCTGGATGCG
GCGCAGGCCCACGACTGGTGGGAGTCCTTGCGCGAGCAGAGCCATGCCTTCTTCGATCGCGGCATGCCCCTGTGGCGGCT
GGCGGTGCCGCCCACCGCGCCCGCGCTGGCGCTGGGCCCCACCCTGATCGAATGGGGCGGCGGACAGCGCTGGCTCAGCG
GCCACTACGATGCGCAGGCGGTGCGCGCGGCGGCCGCCCAGGCGGGTGGGCATGCCACGCTGTTTCGTGCCGCCGGCCGC
GCGGCGCCGGCCGACGGCGTGTTCCATCCCCTTTCGGACGGCGTGGCGGCCATCACGCGCCGCCTCAAGCAGGAGCTGGA
TCCGGCCGGCCTGTTCAACCCCGGGCGTCTGGTGCCGGAACTCTAG

Protein sequence :
MRSGDDGARRSQASVHRRWRHQRVLRQSSCRDAADGHCLLDMTPYRGIVSYQPSELVVTARAGTPLAELEAALAEHGQML
AFEPPHFGPGATLGGCVAAGLSGPRRMAAGAVRDFVLGARLLDSQGHILAFGGEVMKNVAGYDVSRLQAGAQGIFGALLE
VSLKVVPRPAVVESLRLPATQDEALRWFGQWRGRPLPISASCWTADGAADGGGAVVLRLAGAPPAVQAAREVLGGELLDA
AQAHDWWESLREQSHAFFDRGMPLWRLAVPPTAPALALGPTLIEWGGGQRWLSGHYDAQAVRAAAAQAGGHATLFRAAGR
AAPADGVFHPLSDGVAAITRRLKQELDPAGLFNPGRLVPEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 1e-45 49