Gene Information

Name : dnaB (BN117_1797)
Accession : YP_006895750.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1956029 - 1957402 bp
Length : 1374 bp
Strand : +
Note : -

DNA sequence :
ATGAATACCCCTGCCGATCCCCAGCTCGAATACCTGCGCGTGCCGCCGCACTCGATCGAGGCCGAGCAGTCGGTGCTGGG
CGGCCTGTTGCTGGACAACGCCGCCTGGGACCGCATCGCCGACGTCCTGGTCGAGGAAGACTTCTATCGCCACGACCACC
GCCTCATCTGGCACCATATCGCCCGGCTGATCGGCCTGGCCCGCCCGGCCGACGTCATCACCGTCAATGAATCGCTGGCC
AGCGCCGGCAAGTCCGAAGAGGTGGGCGGGCTGGCCTATCTCAACGCGCTGGCGCACAACACCCCGTCGGCGGCCAACAT
CCGCCGCTATGCCGAGATCGTGCGCGAGCGCGCCATGCTGCGCAAGCTGGTGTCGATCGCCGACGAGATCTCGGCGGCCG
CGCTCAATCCGCAAGGCAAGGAGGCCCGCCAGTTGCTGGACGAGGCCGAATCCAAGGTGTTCAAGATCGCCCAGGAGGGC
GAACGCGGCTCGGCGGGTTTCCAGGAAATCCAGCCGCTGCTGACCCAGGTGGTAGAACGGATCGACGAGCTGTATCACCG
CGAAAGCGAGTCCGATGTCACCGGCGTGCCGACCGGCTTCGCTGATCTGGACAAGATGACTTCCGGGCTGCAGGCCGGCG
ACCTGGTCATCGTGGCCGGCCGTCCGTCCATGGGCAAGACCTCGTTCTCGATGAACATCGGCGAGCACGTCGCCATCGAG
CAGGGGCTGCCGGTGGCGGTCTTCTCGATGGAAATGGGCGCGGTGCAGCTGGCCATGCGTATGCTGGGCTCGGTGGGCAT
GCTCGACCAGCATCGCATGCGTACCGGCAAGCTGGTCGCCGACGATTGGCCGCGCGTCACCCACGCGGTGCAACTGATGC
AGGACGCGCAGGTCTACATCGACGAAACGCCAGCGCTCAGCTCGATGGAAGTGCGCGCCCGCGCGCGGCGCCTGGCGCGC
CAGTGCGGGCAGCTGGGCCTGATCATCATCGACTACCTGCAGCTGATGTCGGCCAACAGCGCGGGCGAAAACCGCGCGAC
CGAAATCTCGGAAATCAGCCGCTCGCTCAAGGGCCTGGCCAAGGAGCTCAACTGTCCGCTGATCGCGCTGTCGCAGCTCA
ACCGCAGCCTGGAGCAGCGCCCCAACAAGCGGCCGGTGATGAGCGACCTGCGCGAATCCGGCGCCATCGAGCAGGACGCC
GACGTGATCCTGTTCATCTATCGCGACGAGGTCTACAACCCGGACTCGCCCGACAAGGGCTCGGCCGAGATCATCATCGG
CAAGCAGCGTAACGGTCCGATCGGCACCGTGCGCCTGACCTTCCAGGGGTCGAGCACGCGCTTTCTCAATTTCGCGCCCG
GCACCCAGTACTGA

Protein sequence :
MNTPADPQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLVEEDFYRHDHRLIWHHIARLIGLARPADVITVNESLA
SAGKSEEVGGLAYLNALAHNTPSAANIRRYAEIVRERAMLRKLVSIADEISAAALNPQGKEARQLLDEAESKVFKIAQEG
ERGSAGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGFADLDKMTSGLQAGDLVIVAGRPSMGKTSFSMNIGEHVAIE
QGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLVADDWPRVTHAVQLMQDAQVYIDETPALSSMEVRARARRLAR
QCGQLGLIIIDYLQLMSANSAGENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGSAEIIIGKQRNGPIGTVRLTFQGSSTRFLNFAPGTQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-105 54
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-89 48
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-91 48
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-91 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-86 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-89 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-82 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-82 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-73 42