Gene Information

Name : hslU (BN117_0175)
Accession : YP_006894259.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : ATP-dependent Hsl protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 180892 - 182226 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGCAAATCACATGACCCCCGGCGAGATCGTCTCCGAACTCGACAAATTCATCATTGGCCAGAATCGCGCCAAGCG
CGCGGTCGCGGTGGCGCTGCGCAACCGCTGGCGGCGCCAGCAGGTCGCCGAGCCGCTGCGCCATGAGATCCACCCCAAGA
ACATCCTGATGATCGGGCCGACCGGGGTGGGCAAGACCGAAATCGCCCGCCGCCTGGCCAAGCTGGCCAATGCGCCGTTC
ATCAAGATCGAAGCGACCAAGTTCACCGAGGTGGGCTATGTGGGCCGCGACGTCGACACCATCATCCGCGACCTGACCGA
GTACTCGATCAAGCAGACACGCGAGCTGGAAATGCGCCGCGTGCGCAGCCATGCCGAAGACGCGGCCGAAGACCGCATCC
TCGACGCGCTGGTGCCGCCGCCGCGCGGCGCCTCCGGCGAGCCCGAGCGCGACGAGGACAACAGCGCGCGCCAGACTTTC
CGCAAACGCCTGCGCGAGGGCAAGATCGACGACCTGGAGATCGAGATCGAGATCGCCCAGCCCATGCCGCAGATGGCCGT
CATGACGCCGCCCGGCATGGAAGAAATGGCCGAGCAGTTGCGCGGCATGTTCGCCGGCCTGGCGCGCGACAAGAAGAAAT
CCAAGAAGATCAAGGTCAGGGAAGCCTTCAAGCTGATCGTCGAGGAAGAAGCCGCCAAGCGCGTCAACGAAGACGATCTG
CGCGCGGCCGCGATCACCAACGTCGAACAGAACGGCATCGTGTTCCTGGACGAAATCGACAAGATCGCCGCACGCCAGGA
GACGGGCGGCGCCGACGTGTCGCGCCAGGGCGTGCAGCGCGATCTGCTGCCGCTGGTCGAAGGCACCACGGTCAATACCC
GCTACGGCATGGTGCGTACCGACCATATTCTGTTCATCGCCTCGGGCGCCTTCCATCTGGCCCGCCCCTCGGACCTCATC
CCTGAACTGCAGGGACGCTTCCCCATCCGGGTCGAACTGGATTCGCTGAGCGCCGAAGACTTCGTCAGCATCCTGTCCGA
GACGGACGCTTCGCTGATCAAGCAATACACCGCCCTGCTCGGCACCGAGGATGTGAAGCTGGAATTCACCGACGACGGCA
TCCGCCGGCTGGCCGAACTGGCATTCTCGGTCAACGAGCGCACCGAGAACATTGGCGCGCGACGCCTGTACACGGTGATG
GAAAAACTGCTGGAAGAGCTGTCGTTCGATGCCAGCGCCAACTCGGGCGAAGTGATCACCATCGACGCCGCCTACGTCGA
CCTGCAACTGGCCGAGACGGCCGGCAGCCAGGACCTGGCCCGCTACGTGCTGTAG

Protein sequence :
MSANHMTPGEIVSELDKFIIGQNRAKRAVAVALRNRWRRQQVAEPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPF
IKIEATKFTEVGYVGRDVDTIIRDLTEYSIKQTRELEMRRVRSHAEDAAEDRILDALVPPPRGASGEPERDEDNSARQTF
RKRLREGKIDDLEIEIEIAQPMPQMAVMTPPGMEEMAEQLRGMFAGLARDKKKSKKIKVREAFKLIVEEEAAKRVNEDDL
RAAAITNVEQNGIVFLDEIDKIAARQETGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHILFIASGAFHLARPSDLI
PELQGRFPIRVELDSLSAEDFVSILSETDASLIKQYTALLGTEDVKLEFTDDGIRRLAELAFSVNERTENIGARRLYTVM
EKLLEELSFDASANSGEVITIDAAYVDLQLAETAGSQDLARYVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 3e-94 45