Name : gabD (BN117_1509) Accession : YP_006895482.1 Strain : Bordetella parapertussis Bpp5 Genome accession: NC_018828 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 1638101 - 1639570 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGACGCAGTTGACCCAACCCCTGAGCCGCGCCGAACTGCTGCGCGACGCCTGCTACATCGACGGCAAGTGGGTAGGCGC CGGCAACGGCCCGTCCATCCCGGTCGATAACCCGTCCACCGGCAAGACCATCATCTCGGTGCCCAAGCTGGGCCGCAAGG AAGCCGAGCAGGCCATCGACGCCGCCGAGGCCGCCCTGCCCGCCTGGAGCGCCAGGACCGGCAAGGAGCGCGCCGCGATC CTGCTGAAGTGGGCCCAGCTGACGATGGAAAACCAGCAGGACCTGGCCGTCATCATGACGTCCGAGCAAGGCAAGCCCGT AGCCGAGGCCGCCGGCGAGATCGCCTACGCCGCGTCCTTCCTGGAGTGGTTCGCCGAAGAAGCCAAGCGCATCGACGGCG ACATCCTGCAAAGCCCCAAGGGCGGCCAGCGCCTGATGGTGCTCAAGCAGCCCATCGGCGTGACCGCCGCCATCACGCCG TGGAACTTCCCGGCCGCCATGATCACCCGCAAGGTCGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGGTCAAGCCGGC CCAGCAGACGCCGCTGACCGCGCTGGCGCTGGCCGTGCTGGCCGAGCAGGCCGGCGTGCCGGCCGGCGTGTTCCAGGTCG TGACCGGCAGCTCGCGTGAAATCGGCGCGGCCCTGTGCGAAAGCGAAGTGGTACGCAAGCTGAGCTTCACCGGCTCGACC GAAGTCGGCCGCACGCTCATGGAGCAATGCGCGCCCACCATCAAGAAACTGTCGCTGGAACTGGGCGGCAACGCGCCGTT CATCGTGTTCGACGACGCCGACCTGGATCGCGCCATCGACGGCATCCTGGCCTCCAAGTACCGCAACGCCGGCCAGACCT GCGTATGCGCCAACCGCATCTACGTGCAGGCCGGCGTCTACGAGGAAGTGGCCAAGCGCCTGGTCGAGAAGGTCAACGCC ATGAAGGTGGGCGACGGCTTCGAACAGGGCGTCACCCAGGGCCCGCTGATCGACACCGCCGCCGTGGCCAAGGTGCAGGA ACACATCGCCGACGCCACCGCGCACGGCGCCAAGGTCATCGCCGGCGGCCAGCCGCATGCGCTGGGCGGCAGCTTCTTCC AGCCCACGGTGGTGCGCGACGTCACGCAGTCGATGCGCTTTGCCGTCGAGGAAACCTTCGGCCCGGTCGCCCCGCTGTTC AAGTTCGAAAGCGAAGACGAAGTCATCGGCATGGCCAACAACACCATCTTCGGCCTGGCCGCCTACTTCTACACGCGCGA CTACGCCCGGATCTGGCGCGTCTCCGAAGCGCTGGAATACGGCATCGTCGGCATCAACACCGGCATCATCTCCAATGAAG TCGGCCCGTTCGGCGGCGTCAAGCAATCCGGCCTGGGCCGCGAAGGCTCGAAGTACGGGATCGAGGACTACCTCGAGCTG AAATACCTCTGCGTGGACCTGGGCGCCTGA Protein sequence : MTQLTQPLSRAELLRDACYIDGKWVGAGNGPSIPVDNPSTGKTIISVPKLGRKEAEQAIDAAEAALPAWSARTGKERAAI LLKWAQLTMENQQDLAVIMTSEQGKPVAEAAGEIAYAASFLEWFAEEAKRIDGDILQSPKGGQRLMVLKQPIGVTAAITP WNFPAAMITRKVGPALAAGCTMVVKPAQQTPLTALALAVLAEQAGVPAGVFQVVTGSSREIGAALCESEVVRKLSFTGST EVGRTLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAIDGILASKYRNAGQTCVCANRIYVQAGVYEEVAKRLVEKVNA MKVGDGFEQGVTQGPLIDTAAVAKVQEHIADATAHGAKVIAGGQPHALGGSFFQPTVVRDVTQSMRFAVEETFGPVAPLF KFESEDEVIGMANNTIFGLAAYFYTRDYARIWRVSEALEYGIVGINTGIISNEVGPFGGVKQSGLGREGSKYGIEDYLEL KYLCVDLGA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-134 | 64 |
cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-70 | 41 |