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Name : BN117_1206 (BN117_1206) Accession : YP_006895204.1 Strain : Bordetella parapertussis Bpp5 Genome accession: NC_018828 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1321339 - 1322694 bp Length : 1356 bp Strand : + Note : - DNA sequence : ATGCTAGATCCGATACTGCTGCGCAAAGACCTGCAAACCGTCGTCGACCGCCTCAAGAGCCGTGGCGTCGATTTCGACAT CGCCCGGTTCAACGAGCTGGAGTCCCGCCGCAAGGCCGTCCAGACCGAAACCGAGTCGCAGCAGGCGCGCCGCAATGCCT TGGCCAAGCAGATCGGCCAGCTCAAGGGCAAAGGCGCGCCCGAAGCGGAAGTGCAGGCCGTGATGGCCGAGTCGCAGGCC TTGCCGGCCCGGCTCAAGGCGCTCGAGGACGAACTGGCGCAGACGCAGGCGCAACTCAACGACCTGCTGATGTCCGTGCC CAACCTGCCGCACGCCAGCGTGCCGCAGGGCGCGTCCAGCGACGAGAACGTCGAGGTGCGGCGTTGGCTGCCGGGCGCGG CCGACGAGCGTGGCAACCCTGCGGCGCTGGGTTTCGAGGTGCGGGATCACGTGGCGGTGGGCGAGCCGCTGGGCCTGGAT TTCGATCTGGCCGCACGGCTGTCGGGCGCGCGCTTTTCTTTCATGCGCGGCCAGATGGCGCGCCTGCACCGCGCGCTGGC GCAGTTCATGCTGGACTTGCAGACGGGCACGCATGGCTACACCGAGTGCTACACGCCCTACATCGTCAACAGCTCGACCT TGTTCGGCACCGGCCAACTGCCCAAGTTCAAGGACGACATGTTCTTCGTCACCAAGGGCGGCGGCGACGACGAGCCCAAG GTCGACGAGCAGGGCAACCCGCTGGCGCGCGAAGACCAATACCTGATCTCGACCTCGGAAATCACCCTGACCAGTGTGGT GCGCGAGACCATCGTGGCCGGCGCCGACCTGCCGCTGCGCCTGACCGCGCATACGCCGTGCTTCCGCTCCGAAGCCGGCA GCGGCGGGCGCGATACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGCCCATCCCGAG CATTCGTACGAGGCGCTCGAGGAAATGGTCGGCCATGCCGAGCGCGTACTGCAGCTGCTGGAGCTGCCGTACCGCGTCAT GCTGCTGTGCACCGGCGACATGGGTTTCGGCTCGGCCAAGACCTACGACCTGGAGGTCTGGCTGCCGGCACAGGATACCT GGCGCGAGATCTCCTCGGTTTCCAACTGCGAAACATTCCAGGCGCGCCGCATGCAGGCCCGCTTCCGTAACGCGCAGAAC AAGCCCGAATACGTGCATACGCTCAATGGGTCCGGGCTGGCCGTGGGCCGCGCCCTGGTGGCCGTGCTGGAAAACTGCCA GCAAGCCGACGGCAGCGTGCGGGTGCCGGCCGTGCTGCAGCCCTACATGGGCGGCCTGACCGTTCTCGAACCTTGA Protein sequence : MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQA LPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASSDENVEVRRWLPGAADERGNPAALGFEVRDHVAVGEPLGLD FDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPK VDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPE HSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQN KPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-97 | 50 |
