Gene Information

Name : SVEN_6527 (SVEN_6527)
Accession : YP_006882072.1
Strain : Streptomyces venezuelae ATCC 10712
Genome accession: NC_018750
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7129066 - 7131627 bp
Length : 2562 bp
Strand : +
Note : -

DNA sequence :
ATGTCGATGGCGTTCGGTTCACCCTTCGGTTCATCCGATCCGTTCAGCGACATGCTGAATCGGTTCTTCGGAATGTCACC
GGCGTCGTCGCCCCCGGCCGTGCAGCGCGTCCCGATCGGGCGGCTGCTGACCGAGTCCTCGCACGAACTGCTCAACCTCG
CCGCCCGCAAGGCCGGCGAGGACGGCACGTCCGACCTCGACACCGAGCACCTGCTCTGGGCCGCGACCCAGGTGGACCCC
TCCCGCGCACTGCTGTCCCGGATCGGCGTGGACCCCGAGGCGCTCGCCGCCCAGCTCGACGAGGTGCTGCCCCGGGAATC
CCGCGAGCCCTCGGCGGAACCGGGACTCACCCCGGCGGCCAAGCGCACCCTCGCCGCCGCCTACGGCCGCTCGCAGGAGG
CGGGCGTGTCCTACATCGGTCCCGAGCACATCCTCGCCGCCCTCCTCGACGACGCCGACTCGGGCGCCGGGCGGCTGCTC
GGCGCGGACGACCAGGACGTCAGAAAGCTGCGCGGTCTCGCCGACCGGGCGTCCCGCACCGACGGCGGCGCGCCCGCCGC
CGGACGGCAGGCGCAGCAGCCCGCCACCACCCTCGACGAGTACGGCAGGGACCTCACGGACGAGGCGAAGGCGGGCAAGC
TGGACCCGGTGGTCGGCCGTGCCGAGGAGATCGAGCAGACCATCGAGATCCTCTCCCGGCGCTCCAAGAACAACCCGGTG
CTCATCGGCGAGCCCGGCGTCGGCAAGACCGCCATCGTCGAGGGCCTCGCCCAGCGCATCGTGGCCGGTGAGGTGCCCGC
CACCCTCAAGGACAAGCGGGTCGTCTCCCTCGACCTGTCCGGCATGGTGGCCGGCGCGCAGTACCGGGGTCAGTTCGAGG
AGCGTCTGAAGAAGGTCATCGAGGACGTCCAGAACGCCGGCGGCGAGATCATCCTCTTCATCGACGAACTCCACACCGTC
GTCGGCGCGGGCGCGACCGGCGAGGGCTCGATGGACGCCGGCAACATGCTCAAGCCCGCCCTCGCCCGGGGCGAGCTGCA
CGTGGTCGGGGCGACGACGATCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTCGAACGCCGCTTCCAGCCCG
TCCTCATCCCGGAGCCCACGGTCGAGGAGACCGTGCAGATCCTCGAAGGACTGCGGGACGCGTACGAGGCCCACCACCAG
GTCCGGTTCGCCGACGGAGCCCTCACGGCGGCGGCCGAACTCTCCGACCGGTACATCGGCGACCGCTTCCTGCCCGACAA
GGCCATCGACCTGATGGACCAGGCGGGCGCGCGGGTACGGCTGCGCAGCGCCGGCCGCTCCACCGAGGTCGTCAGCCGGG
AGGACCGCATCGCCAAGCTGCGCCGCGAGAAGGACCAGGCCGTCGCCGGCGAGCAGTTCGACAAGGCCGCGGACCTGAAG
CGGCAGATCGCCGAGGTGGAGGGCGAGCTGGCGGGCATCGAGGAGCGCCGGGAGGGCGTTGTCTCGGTCACCGCCGCCGA
CATCGCCGACATCGTCTCGCGCCGCACCGGCATCCCGGTCTCCCAGCTCACCGCCAGCGAGAAGGAGCGGCTGCTGAAGC
TGGAGGAGGAGATGCACGCCAGGATCGTCGGCCAGGACGAGGCCGTCACCGCCGTCTCGGAGGCGGTGCGCCGCAGCCGG
GCCGGCATGGGAGACCCGAACCGCCCCGTCGGCTCGTTCCTCTTCCTCGGGCCCACCGGCGTCGGCAAGACCGAGCTCGC
CAAGACGCTCGCCGGCCTGCTCTTCGGCGACGAGGACCGGATGATCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACA
CGGTCGCCCGGCTCGTCGGTGCCCCTCCCGGCTATGTCGGGTACGAGGAGGCCGGCCAGCTCACCGAGAAGGTGCGGCGC
AACCCGTACAGCGTGGTCCTCTTCGACGAGGTGGAGAAGGCGCACCCCGACGTGTTCAACACGCTGCTCCAGATCCTCGA
CGACGGTCGGCTCACCGACGGCCAGGGCCGTACCGTCGACTTCCGCCACTGTGTGGTGATCATGACGTCCAACATCGGCG
CGCATCGCATCCTGGCGCACGAGGGCGACGCGGCCGAGCTCAAGGACGAGCTGATGGAGGACCTGCGGGGACGCTTCCTG
CCCGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCACAGCCTCACCGAGAAGGACCTGTCGGAGATCGTCGACCA
CCTCCTGGACCGCAGCAAGCACCGGGTCCGCGCGCAGGGCATGACCCTGGAGGTCACCGAGGCGGCGAAGAAGCTCCTGG
TGGCCCACGGCTATCAGCCGGAGTTCGGCGCCCGCCCGCTGCGGCGGACGATCCAGTCGGAACTCGACAACCGCGTGGCG
TCCCTGCTGCTCGGCGGGGAGGCGGACCCGGGGGACACGATCGTCGCCGACGTGATCGACGACTCCCTGCACTGCACCGT
ACGCAAGCACGAGGCCGGGACCGGCACGGGCACGGAACCCGAGCCCGAGCACGGGACCGCGGAGAGCGGCGCGGCGGCGT
GA

Protein sequence :
MSMAFGSPFGSSDPFSDMLNRFFGMSPASSPPAVQRVPIGRLLTESSHELLNLAARKAGEDGTSDLDTEHLLWAATQVDP
SRALLSRIGVDPEALAAQLDEVLPRESREPSAEPGLTPAAKRTLAAAYGRSQEAGVSYIGPEHILAALLDDADSGAGRLL
GADDQDVRKLRGLADRASRTDGGAPAAGRQAQQPATTLDEYGRDLTDEAKAGKLDPVVGRAEEIEQTIEILSRRSKNNPV
LIGEPGVGKTAIVEGLAQRIVAGEVPATLKDKRVVSLDLSGMVAGAQYRGQFEERLKKVIEDVQNAGGEIILFIDELHTV
VGAGATGEGSMDAGNMLKPALARGELHVVGATTIDEYRKHIEKDAALERRFQPVLIPEPTVEETVQILEGLRDAYEAHHQ
VRFADGALTAAAELSDRYIGDRFLPDKAIDLMDQAGARVRLRSAGRSTEVVSREDRIAKLRREKDQAVAGEQFDKAADLK
RQIAEVEGELAGIEERREGVVSVTAADIADIVSRRTGIPVSQLTASEKERLLKLEEEMHARIVGQDEAVTAVSEAVRRSR
AGMGDPNRPVGSFLFLGPTGVGKTELAKTLAGLLFGDEDRMIRFDMSEFQEKHTVARLVGAPPGYVGYEEAGQLTEKVRR
NPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNIGAHRILAHEGDAAELKDELMEDLRGRFL
PEFLNRIDDIIVFHSLTEKDLSEIVDHLLDRSKHRVRAQGMTLEVTEAAKKLLVAHGYQPEFGARPLRRTIQSELDNRVA
SLLLGGEADPGDTIVADVIDDSLHCTVRKHEAGTGTGTEPEPEHGTAESGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_6527 YP_006882072.1 ATP-dependent Clp protease ATP-binding subunit ClpA VFG0080 Protein 2e-158 53
SVEN_6527 YP_006882072.1 ATP-dependent Clp protease ATP-binding subunit ClpA VFG0079 Protein 0.0 50