Gene Information

Name : SVEN_0510 (SVEN_0510)
Accession : YP_006876056.1
Strain : Streptomyces venezuelae ATCC 10712
Genome accession: NC_018750
Putative virulence/resistance : Virulence
Product : Long-chain-fatty-acid--CoA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.2.1.3
Position : 564822 - 566423 bp
Length : 1602 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAGAGGGCTGTGTGCCGTGGCCTGAGTCGGCGGTTCGTACGTACCGGGAGGAGGGCTACTGGACCACGGAGGTCCT
CGGGGTCTGGCCCGCCGCCCGCGCACCGGAGGCACGGGCGAGAACCGCTCTGGTGACGCGGGCCGGGGTCCTGACCCACG
AGGAGGTCGACCGCGCGGCCGACCGCATGGCCGCCGGGCTGCTGGGCGCGGGTCTGGCACCGGGCGACCGGGTCGTGGTG
CAACTCCTCGACGAGGCCGAGCTCGTGGTGCTGAGCCTGGCGCTGTTCCGCACCGGCATCCTGCCGGTGTACGCGCTGCC
CGCGCACCGTTCCGCGGAGATCACCCACCTGGTGAGCACGGCCGGGGCGGCGGCCTACGTCTGCCCGGAGCGGGTGCTCG
ACTGCGACTTCCGGCTCCTCGCCCAGGAGGTGCTCGACCGGACGGACAGCCTCCGGCAGGTGTTCGTGGCGGGCGATCCC
GGGCCGTTCACGGCCCTGTCGTCCGTCGACGCGGAACCCGTGGCGCTGCCGGCGCCCGACCCCGAGGACGTGGCGCTCTT
CCTGCTGTCCGGCGGCACCTCGGGGCCGCCGAAGCTGATCCCGAGGACCCACGCCGACTACGCGTACCAACTGCGCGAGA
CCGCGCGGCTCTGCGGGGTCGGCCCCGACAGCGTCTATCTGGCGGCGCTGCCGGTGGAGCACAACTTCGCCCTCGGCTGC
CCCGGCGTCCTCGGCACGCTGCGCGCCGGCGGAACGGCCGTGATCGCCCCCGCGCCCACGGCCGACGCCTGCTTCCCGCT
GATCGAGCGGGCACGCGTGACGATCACCTCGCTCGTCCCGCCGCTGGTGCCGCTCTGGCTCGACGCGGCGGAGTGGACCG
ACCACGACCTGTCCTCCCTGGAGGTCCTCCAGGTCGGCGGCGCCCGGCTCGATCCGGACACGGCCCGCCAGGTCCCGAAG
GCCCTCGGCTGCACCCTCCAGCAGGTGTACGGGATGGCCGAGGGCCTGCTGAACTTCACCCGGCTCGACGACCCCGAGGA
CGTGATCGTCCACACCCAGGGGCGGCCGCTGTCACCGGCCGACGAGGTGCGGGTGATCCGGGAGGACGGGGCCGAGGCAG
GACCGGGGGAGGTGGGGGAGCTGTTCACCCGTGGCCCGTACACCCTGCGCGGCTACTACCGCGCGGGGGAGCGCAACCGC
ACCCGGTTCACCGAAGACGGCTTCTACCGCACGGGCGACCTCGTGCGGCGCACCGAGCACGGTGACTTCGAGGTCGTCGG
CCGGATCAACGACGTGGTCAACCGGGGCGGGGAGAAGGTGCCCACGCTGGAGGTCGAGGAGCATCTGCTCGCCGCCTTCC
CGCTCCTCGGGGCGGCCGTGATCGCCCTGCCCGACGCCCTGATGGGGGAGCGGACCTGCGCCTGCGTCGTCCCGCGGGAC
CGTGCGAACCCGCCGACCCTGCGGGAGGTGAAGGCCGCGTTCCGGGGCCGTGGCGTCGCCGCGTACAAGGTGCCCGACCA
GCTGGTGGTCCTGGAGCGGCTGCCGATGACGGGCGTCGGCAAGGTCGACAAGCGGGCGCTGCTCGCCCAGCTGGAGACCT
GA

Protein sequence : 
MQEGCVPWPESAVRTYREEGYWTTEVLGVWPAARAPEARARTALVTRAGVLTHEEVDRAADRMAAGLLGAGLAPGDRVVV
QLLDEAELVVLSLALFRTGILPVYALPAHRSAEITHLVSTAGAAAYVCPERVLDCDFRLLAQEVLDRTDSLRQVFVAGDP
GPFTALSSVDAEPVALPAPDPEDVALFLLSGGTSGPPKLIPRTHADYAYQLRETARLCGVGPDSVYLAALPVEHNFALGC
PGVLGTLRAGGTAVIAPAPTADACFPLIERARVTITSLVPPLVPLWLDAAEWTDHDLSSLEVLQVGGARLDPDTARQVPK
ALGCTLQQVYGMAEGLLNFTRLDDPEDVIVHTQGRPLSPADEVRVIREDGAEAGPGEVGELFTRGPYTLRGYYRAGERNR
TRFTEDGFYRTGDLVRRTEHGDFEVVGRINDVVNRGGEKVPTLEVEEHLLAAFPLLGAAVIALPDALMGERTCACVVPRD
RANPPTLREVKAAFRGRGVAAYKVPDQLVVLERLPMTGVGKVDKRALLAQLET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE CAA21394.1 - Virulence HPI Protein 1e-104 50
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 8e-105 50
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 7e-105 50
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-104 50
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 1e-104 50
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-104 50
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-104 50
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 2e-103 49
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 3e-103 49
irp2E YP_005163485.1 siderophore biosynthetic protein Virulence Not named Protein 2e-70 42
irp2E YP_005134497.1 siderophore biosynthetic protein Virulence Not named Protein 2e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_0510 YP_006876056.1 Long-chain-fatty-acid--CoA ligase VFG0168 Protein 6e-102 48
SVEN_0510 YP_006876056.1 Long-chain-fatty-acid--CoA ligase VFG1817 Protein 2e-104 47
SVEN_0510 YP_006876056.1 Long-chain-fatty-acid--CoA ligase VFG0932 Protein 6e-86 42