Gene Information

Name : SVEN_4132 (SVEN_4132)
Accession : YP_006879677.1
Strain : Streptomyces venezuelae ATCC 10712
Genome accession: NC_018750
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system,ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4474268 - 4475110 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence : 
GTGAGCAGGCTGACCGCGCGCGAGCTGACGCTCGCCTACGAGGACCGCACCGTCGTCCACGAGCTGGACCTGGCGATCCC
CGACGGCAAGGTGACCGTGATCGTCGGCCCCAACGCCTGCGGCAAGTCCACCACCCTGCGGGCCCTCGGACGGCTCCTCA
GGCCGGCGGGCGGCGCGGTCCTCCTCGACGGGGAGGAGCTCGCCAAGCTCCCGACGAAGCGGATCGCCCGCTCCATCGGG
CTGCTCCCGCAGACCCCGGTCGCCCCCGAGGCGATCACCGTCGCCGACCTCGTCTCACGCGGCCGCCAGCCCCATCAGGC
CTGGTGGAAGCAGTGGTCGGAGGAGGACGAGCGGGCGGTCACCGAGGCCATGGACCGCACGGACGTGGCCGCGCTCGCCG
ACCGGTCCGTGGACGAGCTGTCGGGCGGGCAGCGGCAGCGGGTGTGGATCGCGATGGCCCTCGCCCAGGAGACGGACCTG
CTGCTCCTCGACGAGCCGACCACCTACCTGGACATCTCCCACCAGGTCGAGGTCCTCGACCTGGTGCGCCGCCTCAACCG
GCTGCGCGGCCGCACGGTCGTCGTCGTCCTCCACGACCTGAACCAGGCCGCCCGGTACGCCGACCACCTGGTCGCGATGA
AGGCGGGCCGGGTGGTCGCGGAGGGCCCGCCGTCGGAGATCGTGACGGAGCAGCTCGTACGGGATGTGTTCGGGTTGTCG
TCGGTCGTGGTCCCGGACCCGGTGACGGGGTCACCCCTGGTGGTGCCGGGGGCGCCGTGGGAGGGGGACGGGGCGGGTGC
CGGTGCGGTGACGAGCGCGGGTACGGACACGGTCAAGGGCTGA

Protein sequence : 
MSRLTARELTLAYEDRTVVHELDLAIPDGKVTVIVGPNACGKSTTLRALGRLLRPAGGAVLLDGEELAKLPTKRIARSIG
LLPQTPVAPEAITVADLVSRGRQPHQAWWKQWSEEDERAVTEAMDRTDVAALADRSVDELSGGQRQRVWIAMALAQETDL
LLLDEPTTYLDISHQVEVLDLVRRLNRLRGRTVVVVLHDLNQAARYADHLVAMKAGRVVAEGPPSEIVTEQLVRDVFGLS
SVVVPDPVTGSPLVVPGAPWEGDGAGAGAVTSAGTDTVKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-47 55
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-42 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-42 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-43 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-43 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-37 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-42 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-42 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-29 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_4132 YP_006879677.1 ABC-type Fe3+-siderophore transport system,ATPase component BAC0164 Protein 2e-37 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_4132 YP_006879677.1 ABC-type Fe3+-siderophore transport system,ATPase component VFG0925 Protein 2e-48 57
SVEN_4132 YP_006879677.1 ABC-type Fe3+-siderophore transport system,ATPase component VFG1042 Protein 2e-37 48