Gene Information

Name : SVEN_3425 (SVEN_3425)
Accession : YP_006878970.1
Strain : Streptomyces venezuelae ATCC 10712
Genome accession: NC_018750
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3741581 - 3744172 bp
Length : 2592 bp
Strand : -
Note : -

DNA sequence :
GTGGACGCCGAACTGACCAACCGGAGCCGGGACGCGATCAACGCGGCCAGCAGCCGCGCCGTGTCCGAAGGACACGCCGA
CCTGACCCCCGCGCACCTGCTGCTCGCGCTGCTCACCGGTCAGGACAACGAGAACATCACCGACCTGCTCGCCGCCGTCG
AAGCCGACCAGGCGGTCGTGCGCGCCGGCGCGGAGCGGCTCCTCGCCGCCCTGCCGAGCGTCACCGGCTCCACGGTCGCG
CCCCCGCAGCCCAGCCGCGACTTCCTCGCCGTCGTCGCCGAGGCCGACCGGCAGGCCAAGGAACTCGGCGACGACTACCT
GTCCACCGAGCACCTCCTCGTCGCGATCGCGGCCAAGGGCGGCCAGACCGGTGAGATCCTCGACGCGCAGGGCGCGAGCG
CTTCGAAGCTGCTCGACGCGTTCGAGAAGAGCAGGGGAGGACGCCGGGTGACCACACCCGACCCGGAGGGGCAGTACAAG
GCGCTGGAGAAGTTCGGCACGGACTTCACCGCCGCCGCGCGCGAGGGCAAGCTGGACCCGGTCATCGGCCGCGACCACGA
GATCCGCCGCGTCGTGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTCCTCATCGGTGAGCCCGGCGTCGGCAAGA
CCGCCGTCGTCGAAGGCCTCGCCCAGCGGATCGTCAAGGGCGACGTGCCCGAGTCCCTGAAGAACAAGCGGCTGGTCTCG
CTCGACCTCGGCGCCATGGTCGCCGGAGCCAAGTACCGCGGCGAGTTCGAGGAGCGGCTCAAGACCGTCCTCTCCGAGAT
CAAGGCCAGCGACGGCCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCGGGCGCCGGCGGCGACTCCG
CCATGGACGCCGGCAACATGCTCAAGCCCATGCTGGCCCGCGGCGAGCTCCGCATGGTCGGCGCGACCACCCTCGACGAG
TACCGCGAGCGGATCGAGAAGGACCCCGCCCTGGAGCGCCGCTTCCAGCAGGTCCTGGTCGCCGAGCCCACCGTCGAGGA
CACCATCGCGATCCTCCGCGGCCTCAAGGGCCGGTACGAGGCCCACCACAAGGTGCAGATCAACGACTCCGCGCTGGTGG
CCGCCGCGACCCTCTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCGGCC
TCCCGGCTCCGCATGGAGATCGACTCGTCCCCGGTCGAGATCGACGAGCTCCAGCGCTCCGTCGACCGGCTCCGCATGGA
GGAGCTGGCCCTCAGGAACGAGACGGACGCGGCGAGCAAGCAGCGCCTGGAGAAGCTGCGGCGCGACCTCGCCGACCGCG
AGGAGGAGCTGCGCGGCCTGACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGGGTCGGCGAGCTGAAGGAGCGC
CTCGACGAGACCCGCGGCCGCGCCGAGCGCGCCCAGCGCGACGGGGACTTCGACACCGCGTCCAAGCTGCTCTACGGCGA
GATCCCGGCCCTGGAGCGCGAGCTGGAGGAGGCGAGCGAGGCCGAGGCCCAGCAGGAGTCCGCCAAGGACACGATGGTCA
AGGAGGAGGTCGGCCCCGATGACATCGCGGACGTGGTCGGCTCCTGGACCGGCATCCCCGCCGGGCGCCTCCTGGAGGGC
GAGACGCAGAAGCTGCTGCGCATGGAGGACGAGCTCGGCAAGCGGCTGATCGGCCAGTCCGAGGCCGTCCAGGCCGTCTC
CGACGCCGTCCGCCGCACCCGCGCGGGCATCGCCGACCCCGACCGGCCCACCGGCTCCTTCCTCTTCCTCGGCCCCACGG
GCGTCGGCAAGACGGAGCTGGCGAAGGCGCTCGCGGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATG
TCGGAGTACGGCGAGAAGCACAGCGTCGCCCGCCTGGTCGGCGCGCCTCCCGGCTACGTCGGGTACGAGGAGGGCGGCCA
GCTCACGGAGGCCGTCCGCCGCCGCCCGTACAGCGTGGTGCTGCTCGACGAGGTGGAGAAGGCGCACCCGGAGGTCTTCG
ACGTCCTGCTCCAGGTCCTGGACGACGGACGGCTGACCGACGGGCAGGGCCGGACGGTGGACTTCCGCAACACCATCCTG
GTCCTCACCTCGAACCTCGGCAGCCAGTACCTGGTCGACCCGGTGACCCCGGAGGAGACGAAGAAGCAGCAGGTCATGGA
CGTGGTCCGGGCCAGCTTCAAGCCGGAGTTCCTCAACCGGCTGGACGACCTGGTCGTCTTCTCAGCCCTCGACCGGGCCG
AGCTCGGCCGCATCGCGCGCCTCCAGATCGACCGGCTCGCCAAGCGGCTCGCCGAGCGCCGGCTCACCCTGGACGTCACC
CCGCAGGCCCTGGAGTGGCTCGCCGAGGAGGGCAACGACCCGGCGTACGGCGCCAGGCCGCTGCGCCGCCTCATCCAGAC
GGCGATCGGCGACCGACTGGCCAAGGAGATCCTCGCGGGCGAGGTCCAGGACGGCGACACGGTCCGCGTGGACCGCTTCG
AGAACGGCCTGATCGTGGGCCCGGCCCGCTAG

Protein sequence :
MDAELTNRSRDAINAASSRAVSEGHADLTPAHLLLALLTGQDNENITDLLAAVEADQAVVRAGAERLLAALPSVTGSTVA
PPQPSRDFLAVVAEADRQAKELGDDYLSTEHLLVAIAAKGGQTGEILDAQGASASKLLDAFEKSRGGRRVTTPDPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDHEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVS
LDLGAMVAGAKYRGEFEERLKTVLSEIKASDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHKVQINDSALVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPVEIDELQRSVDRLRMEELALRNETDAASKQRLEKLRRDLADREEELRGLTARWEKEKQSLNRVGELKER
LDETRGRAERAQRDGDFDTASKLLYGEIPALERELEEASEAEAQQESAKDTMVKEEVGPDDIADVVGSWTGIPAGRLLEG
ETQKLLRMEDELGKRLIGQSEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDM
SEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFRNTIL
VLTSNLGSQYLVDPVTPEETKKQQVMDVVRASFKPEFLNRLDDLVVFSALDRAELGRIARLQIDRLAKRLAERRLTLDVT
PQALEWLAEEGNDPAYGARPLRRLIQTAIGDRLAKEILAGEVQDGDTVRVDRFENGLIVGPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_3425 YP_006878970.1 ClpB protein VFG2084 Protein 9e-101 41