Gene Information

Name : SVEN_3223 (SVEN_3223)
Accession : YP_006878768.1
Strain : Streptomyces venezuelae ATCC 10712
Genome accession: NC_018750
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3534350 - 3536872 bp
Length : 2523 bp
Strand : -
Note : -

DNA sequence :
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTTCTGGGCCTTATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCTCGCGCCAAGAAGGTCCTGGAGCTCTCGCTCCGTGAGGCCCTCCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTGAAGCTGGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAAGCCGCCACGGCCGGCGGTCCTGCCGAGGGCACC
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGGCGCAACCTCACCCAGGCCGCCCGCGAATCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCCGTCCTCATCGGCGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCGCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTCGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACCCTCGTGGGTGCGGGCGCCG
CCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGCGGTGAGCTCCAGACCATCGGTGCGACCACG
CTGGACGAGTACCGGAAGTACCTGGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCGTC
GCTGCCGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGGTACGAGGCCCACCACCGGGTCTCCATCACCGACGAGG
CCCTCGTCCAGGCCGCGACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTCCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGCTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGGCGT
CCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCGCTCCGCGACAAGGAGAAGCAGCTCC
TCGCCGCGAAGGCCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTGGCCGAGGTCGACGGCGATCTGATC
GCCGAGGTCCTCGCGACGGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCAGCCGCCTGCTCCGCATGGA
GGACGAGCTCCACAAGCGCGTCATCGGGCAGAAGGACGCCGTCATCGGCCTCTCGCGGGCCATCCGCCGTACGCGTGCCG
GTCTGAAGGACCCGAAGCGCCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTTTCCAAG
GCGCTCGCCGAATTCCTCTTCGGCGACGAGGACGCGATGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
TTCCCGTCTCTTCGGTTCGCCGCCCGGATACGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTCGTGCTCTTCGACGAGGTCGAGAAGGCCCACCCCGATATCTTCAATTCCCTTCTCCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACCACCAACCTCGGGACCAG
GGACATCTCGAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGACACGAAGTCCAACTACGAGCGGATGAAGGCGAAGG
TCAGCGACGAGCTGAAGCAGCACTTCCGCCCGGAGTTCCTCAACCGTGTGGACGACATCATCGTCTTCCCGCAGCTGACC
CAGGACGACATCCTCCAGATCGTCGACCTGATGATCAGCCGCGTCGACGAGCGCCTCAAGGACCGGGACATGGGCATCGA
GCTCTCCCAGTCCGCGAAGGAGCTGCTCGCCAAGAAGGGCTACGACCCCGTGATGGGCGCCCGGCCGCTGCGCCGGACGA
TCCAGCGCGAGATCGAGGACTCGCTCTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTCGTGGAC
ACGGAGGGCGAGGGCGACGAGCGCACCTTCACCTTCCGCGGCGAGGAGAAGACGGCCCTGCCGGACGCCCCGCCGATCGA
GGCCACGGGCGGCACGGGCCCGAACCTGTCGAAGGACGCGTAA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGDLI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAVIGLSRAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKAKVSDELKQHFRPEFLNRVDDIIVFPQLT
QDDILQIVDLMISRVDERLKDRDMGIELSQSAKELLAKKGYDPVMGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVD
TEGEGDERTFTFRGEEKTALPDAPPIEATGGTGPNLSKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVEN_3223 YP_006878768.1 ATP-dependent Clp protease VFG0079 Protein 0.0 62
SVEN_3223 YP_006878768.1 ATP-dependent Clp protease VFG0080 Protein 4e-150 54