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Name : Emtol_0934 (Emtol_0934) Accession : YP_006872112.1 Strain : Emticicia oligotrophica DSM 17448 Genome accession: NC_018748 Putative virulence/resistance : Unknown Product : two component transcriptional regulator, winged helix family Function : - COG functional category : - COG ID : - EC number : - Position : 695413 - 696102 bp Length : 690 bp Strand : + Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ppn:Palpr_1546 DNA sequence : ATGAATAACCCAACAATATTAATCATCGACGACGAAGTTCAGATTCGTAAATTATTAGAAATAACCCTTTCTGCCAACAA TTTTCGAGTATATGAGGCTAGTACAGGTAAAGAGGGACAAATTTCGGCAGCGATGCACCCACCAGATTTGATTTTACTCG ACTTAGGTCTGCCAGACGAAGATGGACAAAGTATCTTGAAAAGGCTCAGAGAATGGTACAAAGCTCCTGTCATTATTCTT TCGGTACGAGATAACGAAGACGACATCATTCAGGCACTTGATAGTGGTGCAAACGATTATCTGACGAAGCCTTTTCGCAC AGGCGAACTACTAGCTCGAATCCGAACCGCACTCCGATTGGCACAAAACACCGAAAATGTGCCTTTACGAGAATATGGAA ATCTAAGTATTGATTTTACTTCGAGAATCGTGAAGAAAAATCAAGAAGTTTTGAAGCTAACTACCACCGAATATCAATTA TTGGTATTGATGGCTCAGAATGAAAGTAGGGTTTTGACACACCAATTTCTTTTGAAAACTATTTGGGGGCCAAGTTATCT TGAACAATCGCAGTATTTGAGGGTTTTTGTGCGACAACTCCGCAAAAAAATCGAAGATAACCCCGACCAACCCAAATACA TAATCACCGAATCGGGGGTTGGCTACCGATTTATCGGAGGCGAAAAATAG Protein sequence : MNNPTILIIDDEVQIRKLLEITLSANNFRVYEASTGKEGQISAAMHPPDLILLDLGLPDEDGQSILKRLREWYKAPVIIL SVRDNEDDIIQALDSGANDYLTKPFRTGELLARIRTALRLAQNTENVPLREYGNLSIDFTSRIVKKNQEVLKLTTTEYQL LVLMAQNESRVLTHQFLLKTIWGPSYLEQSQYLRVFVRQLRKKIEDNPDQPKYIITESGVGYRFIGGEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 2e-28 | 46 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 1e-28 | 46 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 6e-27 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
