Gene Information

Name : Emtol_0784 (Emtol_0784)
Accession : YP_006871963.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 518840 - 519529 bp
Length : 690 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: sli:Slin_0732

DNA sequence : 
ATGATGGAAAATAAAAAAATATTAATTGTTGAAGACGAAGTAAAAGTTGCAACTTTCATAAAAAAAGGTTTGCAAACGCA
AAATTTTGAAGCCGAAGTGGCTGAAACGGGTAGCGATGCAAAACAACTTTTTGAAACCGAAAACTTCGATCTCATAATAT
TAGATATTGGTCTGCCAGATATGAGTGGCTTAGATTTTTGTGAATTTGTTCGTGCAAAAAACACCAAAATTCCTGTTTTA
ATGCTCACGGCATTGGGCAGTGTAGCCGATAAATTGTCAGGGTTTGAGGTTGGTACTGATGATTACATGGTAAAACCCTT
TGATTTTATGGAGCTTTTAGTTCGTGTAAAAGCCCTTCTCAAACGAACAACCGAGGTAGAACAACCAGCCGAAAAACTTC
AAGAGGCCGACTTAGAGTTAGATTTAAAGGAAAAGGTAGCTCGACGAGATGGGAAAGTAGTGGAGTTGACCGCCAAAGAA
TTTAGTTTACTTGAATATCTGATGCTAAACAAAGGAAGAGTAGTGTCGAAAGTTGATATTGCCGAAAAAGTTTGGGATAT
TAATTTTGATACGGGTACGAATTTTATAGAAGTATATGTAAATTATCTTCGTAATAAAATCGACAAGGGTTTTTCAAATA
AACTTATCCATACAATAGTAGGTATGGGTTATATGCTAAAAAATAAATGA

Protein sequence : 
MMENKKILIVEDEVKVATFIKKGLQTQNFEAEVAETGSDAKQLFETENFDLIILDIGLPDMSGLDFCEFVRAKNTKIPVL
MLTALGSVADKLSGFEVGTDDYMVKPFDFMELLVRVKALLKRTTEVEQPAEKLQEADLELDLKEKVARRDGKVVELTAKE
FSLLEYLMLNKGRVVSKVDIAEKVWDINFDTGTNFIEVYVNYLRNKIDKGFSNKLIHTIVGMGYMLKNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0083 Protein 4e-45 47
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0197 Protein 9e-45 47
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0111 Protein 1e-47 47
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0638 Protein 1e-38 47
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0125 Protein 1e-46 46
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0347 Protein 5e-42 44
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family BAC0308 Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_0784 YP_006871963.1 two component transcriptional regulator, winged helix family VFG0596 Protein 5e-36 41