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Name : Emtol_4307 (Emtol_4307) Accession : YP_006875457.1 Strain : Emticicia oligotrophica DSM 17448 Genome accession: NC_018748 Putative virulence/resistance : Unknown Product : UMUC domain protein DNA-repair protein Function : - COG functional category : - COG ID : - EC number : - Position : 4789095 - 4790390 bp Length : 1296 bp Strand : - Note : PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126; KEGG: ppn:Palpr_2947 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; SPTR: DNA DNA sequence : ATGATTGCATTAGTAGATTGTAATAATTTCTATGCTTCTTGCGAACGACTTTTTAGACCTAAGTTAGCAGAGAAACCTGT GATAGTTTTATCGAATAATGATGGTTGCATCATTGCTCGCTCAAATGAGGCTAAGGCCTTAGGTATTGGCATGGGAGAAC CTTTCTTCAAGGTGAAAGAATTAATAGAACGCCATGATATTGCTGTATTTTCTTCTAATTATGCTTTGTATGGAGATATC TCAGATAGAGTGATGAAAACACTTTATGAGTTTGCTCCACAAATTGAAATTTATTCTATTGATGAAGCATTTCTTGACCT TAGTAATTTACGGCATACTGATATTTTTGAGTATTGTCAAATGATTCGTGCAAAAGTAAGGCAATATACTGGTATTCCTG TTTCAATTGGTATTGCTCCTACCAAGACGCTTGCTAAATTGGCAAATAATTACGCAAAAAAGCATAGAAAGGAAACAGGT GTATGTATTTTAGACAATGACGTAGATACCCAGATAGCCTTGCAAATGACAAAAGTGGAAGATATTTGGGGAATTGGCCG ACAATACACGAAGTTTTTAATGCAGAACCATATCAATACAGCCTATGATTTTTTGCAACTACCCCAAAATTGGATTTTAA AAAATCTTAAGATTGTGGGATTAAGAACCCAAAATGAACTGAATGGTAAACCCTGTATTTCTTTAACGTTAAATCCTGAA CCAAAAAAATCAATTTTGAGTTCTCGTTCATTTGTGAAGAAAATTTCAACGATTGAGCCAATGAAAGATGCCGTGGCTTG TTTTGCTGCTCGTTGCGGTGAAAAACTTCGTCAACAGGGTAGTTGTGCGAGTTTATTGCATGTTTATATACAAACGAATC CTTTTCGACCAGAGGAAAAACAATATTTTAATTCGATAGTCATTCAGTTAGCCATACCCACTTCATATACACCAAGTTTG ATTGAGGCAGCTCATAAGGCATTAGCACGCATCTATAAGGATGGCTACCGATATAAAAAAGCAAGTGTGATGGTTAGCGG AATTGTCCCTAATAATCAGTTACAAGCGAATTTATTTGAAGAACAACTCCAGACACACAGAGAAAGAACGCTTGTTCATA AAATGGATTCTCTGAATAAATTGATGGGCAGAGATAAGATAAAATTTGCCGCACAGGGTAATTTGTGGAAATATCAACCT GACGATTCAAAAAAATACGTAAGCCCAGCCAATTGTTACACAACTCGGATTCATGAAATACTGACAGTAGATGAAAAATT GCACGAAAAATATTAA Protein sequence : MIALVDCNNFYASCERLFRPKLAEKPVIVLSNNDGCIIARSNEAKALGIGMGEPFFKVKELIERHDIAVFSSNYALYGDI SDRVMKTLYEFAPQIEIYSIDEAFLDLSNLRHTDIFEYCQMIRAKVRQYTGIPVSIGIAPTKTLAKLANNYAKKHRKETG VCILDNDVDTQIALQMTKVEDIWGIGRQYTKFLMQNHINTAYDFLQLPQNWILKNLKIVGLRTQNELNGKPCISLTLNPE PKKSILSSRSFVKKISTIEPMKDAVACFAARCGEKLRQQGSCASLLHVYIQTNPFRPEEKQYFNSIVIQLAIPTSYTPSL IEAAHKALARIYKDGYRYKKASVMVSGIVPNNQLQANLFEEQLQTHRERTLVHKMDSLNKLMGRDKIKFAAQGNLWKYQP DDSKKYVSPANCYTTRIHEILTVDEKLHEKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 8e-65 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 8e-65 | 43 |
