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Name : Emtol_3892 (Emtol_3892) Accession : YP_006875045.1 Strain : Emticicia oligotrophica DSM 17448 Genome accession: NC_018748 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 4284188 - 4286314 bp Length : 2127 bp Strand : - Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR018974:IPR003029:IPR006641; KEGG: dfe:Dfer_1085 RNA binding DNA sequence : ATGACTCCAAAACAAATTCAAATTATTGCTCAAACAGTAGGTGTGAGCGAAAAAAGTATCCAAAATACCATTAATTTATT CGAAGAAGGAGCAACAGTACCATTTATTTCTAGATACCGTAAAGAAATGACTGGTAGCATGGACGAAGTACAAATTGCTA ATACCAAAGAATTATACAATAAATTTCAAGAAGCGGATAAACGCCGTGAAGCAATCATAAAATCTATTGAAGAACAAGGT AAAATGACACCTGAGTTATTAAATAAACTCAAAAATGCACTTTACCTAAACGAACTAGAAGATTTATATCTCCCTTACAA GCAAAAACGAAAAACGAGAGCGATAATAGCTATTGAAAAGGGCCTTGAACCACTTGCTAAAATAATTTTTGCTCAAAAAG ACAGAAATATTGAAGCAATTGCTGAAAAATACCTAAATGAGCAAGTAGAAAATGTGAATGATGCTCTTCAAGGTGCAAGA GATATTATGGCAGAGTGGATTAACGAAGATATTCAAGCCAGAAATGCAGTTCGCAAACTATTCGAACGTGAAGCAATTAT TACTTCTAAAGTTAAAAAAGGCAAAAAAGAAGAAGGAATTAAATATCAAGATTATTATGATTTCTCCGAACCGCTTTCAA AAATTCCATCTCACCGCCTATTGGCACTTCGCCGTGGTGAAGAAGAAGGTATTCTCTCGATTGATATTTCAATTGAAGTA GAACGTGGCGTAGATGCCCTCGACCGTATTTATCTACGCGGCTTACCTGAAGCTAAAGAGCAAGTAGAACAAGCTATCAG TGATTCGTATGACCGTTTATTGAAGCCGAGTATCGAAACTGAATTTAGTAATATTTCTAAGCAAAGAGCTGATAGTGAAG CAATAAAGATTTTTGCAACCAATCTTCGTCAGCTGCTTCTAGCTTCTCCGTTGGGGCAGAAAAGAGTATTAGGCATAGAC CCCGGATTTAGAACTGGATGTAAAACTGTATGCTTGAATGAACAAGGAGATTTATTGTTCGATACAGTAATTTATCCTAT GGATAAGAAAATTGAAGCAGAAGCAGTTGTTAAAAAATTAATACTTGAATATCGAATAGATGCCATTGCCATTGGAAATG GAACTGCGAGCAGAGAAACAGAGGCTTTTATAAAAAACCTTATTAAAGCATCCAACGGTTTATTGAAAGTTGCAGTTCAT GTTGTTTCCGAACAAGGGGCTTCTATTTATTCGGCTTCACCCATTGCTCGCGATGAATTTCCGAATAAAGATGTAACCGT TAGAGGAGCCATATCTATTGCAAGAAGATTAATGGACCCGCTTGCAGAATTGGTTAAAATTGACCCAAAATCAATCGGTG TTGGCCAATATCAGCATGATGTAGAACAAAAAATGCTGAAAGAGAGTCTTGATTCAGTAGTAGAAAGTTGTGTAAACTTA GTTGGCGTTGAGTTAAATACCGCCAGTAAACACTTATTGAGTTATGTTTCAGGATTAGGCCCTTCATTGGCACAAAATAT CGTAGAATATCGTGCAAAAAATGGTGCTTTCAGTTCAAGAGAAGAACTCAAAAAAGTACCACGCTTAGGTGCAAAAGCAT TCGAACAATGTGCAGGATTTCTTAGAATTAGAGGAGCTGAAAACCCATTAGATAATTCAGCTGTGCACCCAGAAACTTAT GCAATAGTACAGAAAATGGCCAAAGATTTAGGTGTTAAGGTTTCAGAATTAATTGGTAATGAGCAGCTTAAATCAAAAAT TGTATTAAAGAATTATGTCACCGAAACGGTTGGAATTCCTACGCTAAATGATATTTTATCAGAATTACAAAAACCAGGTC GTGACCCTCGTGAAGCCCTTGAAGCATTTGAGTTTTCGGCCGATGTTCACTCAATGGAAGACCTAAAAGTAGGTATGATT CTTCCAGGAATTGTAACCAATATTACGGCTTTTGGATGTTTTGTAGATATTGGTGTTCATCAAGATGGTTTAGTACACGT ATCGCAGATGTCTAATAAATTCATTAAAGACCCCAATGAAGTAGTTAAGGTTCATCAAAAAGTACAAGTAAAAGTAATGG AAGTTGATATTCCAAGAAAACGAATTGGTCTTTCAATGAAGTTTTAG Protein sequence : MTPKQIQIIAQTVGVSEKSIQNTINLFEEGATVPFISRYRKEMTGSMDEVQIANTKELYNKFQEADKRREAIIKSIEEQG KMTPELLNKLKNALYLNELEDLYLPYKQKRKTRAIIAIEKGLEPLAKIIFAQKDRNIEAIAEKYLNEQVENVNDALQGAR DIMAEWINEDIQARNAVRKLFEREAIITSKVKKGKKEEGIKYQDYYDFSEPLSKIPSHRLLALRRGEEEGILSIDISIEV ERGVDALDRIYLRGLPEAKEQVEQAISDSYDRLLKPSIETEFSNISKQRADSEAIKIFATNLRQLLLASPLGQKRVLGID PGFRTGCKTVCLNEQGDLLFDTVIYPMDKKIEAEAVVKKLILEYRIDAIAIGNGTASRETEAFIKNLIKASNGLLKVAVH VVSEQGASIYSASPIARDEFPNKDVTVRGAISIARRLMDPLAELVKIDPKSIGVGQYQHDVEQKMLKESLDSVVESCVNL VGVELNTASKHLLSYVSGLGPSLAQNIVEYRAKNGAFSSREELKKVPRLGAKAFEQCAGFLRIRGAENPLDNSAVHPETY AIVQKMAKDLGVKVSELIGNEQLKSKIVLKNYVTETVGIPTLNDILSELQKPGRDPREALEAFEFSADVHSMEDLKVGMI LPGIVTNITAFGCFVDIGVHQDGLVHVSQMSNKFIKDPNEVVKVHQKVQVKVMEVDIPRKRIGLSMKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-147 | 49 |
