Gene Information

Name : Emtol_3866 (Emtol_3866)
Accession : YP_006875019.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Virulence
Product : transcriptional regulator, XRE family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4250702 - 4250923 bp
Length : 222 bp
Strand : +
Note : PFAM: Helix-turn-helix; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: sli:Slin_0313 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE fami

DNA sequence :
TTGATTTTCGCCCAAAATTTTATGAAGAATAGAATAAGAATAGAACGGGCTATTTTAGATATTACTCAAGCAGACCTAGC
CGAAAAAATAAATGTAAGTAGGCAGACTATAAATGCTATTGAAAGCAACAAATATGTTCCTTCTACTGTTTTAGCTTTAA
AGATTGCTAGAATTTTTGGGAAAAGTGTTGAAGAAGTTTTTGAACTCGAAGAAAACGATTAA

Protein sequence :
MIFAQNFMKNRIRIERAILDITQADLAEKINVSRQTINAIESNKYVPSTVLALKIARIFGKSVEEVFELEEND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-09 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-07 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-07 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_3866 YP_006875019.1 transcriptional regulator, XRE family VFG2175 Protein 1e-07 45
Emtol_3866 YP_006875019.1 transcriptional regulator, XRE family VFG2168 Protein 1e-07 45