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Name : Emtol_3133 (Emtol_3133) Accession : YP_006874293.1 Strain : Emticicia oligotrophica DSM 17448 Genome accession: NC_018748 Putative virulence/resistance : Resistance Product : Rhodanese-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 3377445 - 3378860 bp Length : 1416 bp Strand : + Note : PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: shg:Sph21_3587 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Metallo- DNA sequence : ATGTTTTTTCAACACGTATATGACAAATCATTGGCTCAAGCGAGCTACTTTATTGGCTGCCAAAAAGCTGGTGTTGCCCT TGTAATCGACCCGAAAAGAGATATTGATACCTATCTCGAAATTGCCAAGCAAAATAATATGAAAATTACCCACGTGACAG AAACGCACATTCATGCTGATTTTCTTTCTGGGGCAAGAGAATTGGCTGCGGTTACGGGTGCTCAACTCTACTTATCAGAT GAAGGTGGTGAAGGATGGGAATATGAGTTTGAACACGTTGGGCTAAAAGATGGCAGTATTTTTTATGTTGGAAACTTAAA ACTAGAAGTTTTACATACACCGGGGCATACGCCAGAAAGTATTAGCTTCTTACTTACTGACCAACCTGCAAGCCCAGAGC CAGTGATGTTGTTTACAGGCGATTTTGTTTTTGTAGGAGATGTTGGTCGCCCTGATTTATTAGAAAAAGCCGCAGGTGTG GCGGGTACAAAAGAAGCAGGTGCTTTAGAAATGTATAAATCAATTCAGCGTTTCAATGCCTTACCCGATTTCTTGCAAGT TTGGCCAGGACACGGAGCTGGTTCGGCATGTGGAAAAGCATTAGGTGCAGTGCCAAGTTCGACAGTTGGATATGAGAAAA TCAGAAACTGGGCATTCCAGTATGAAGATAATAAAGATGGATTTGTACAGTACCTACTAGCTGACCAACCTGAACCACCA AAGTATTTTGCCATGATGAAGCACTTGAATAAAGTTGCTCGTCCGCTACTGACAGAAGTACCACAACAGAAAAAGTTAAG TGCAGAAGAAGTAAAGGATGCAATGGCAAAAGGTGTAAAACTCATAGATACACGTAATAAGATTGATTTTGCTGCTGGCT ACGTACCTGGTAGTATCAATATTCAAGGAAACAATTCTTTTGCTACTTGGATGGGTTGGTTTGTGAACTACGAAGAGCAA TTTATGTTGGTAGCTTCGGAGTCCCAAATTGAAGACCTTACCCGTAAATTAATGCGTATAGGTTTAGATAACGTTTTGGG GTATATTACAGATGTTGGCAATTTAGGGCTTGAACTTCAAAAAAGTGATGTCATCGGAATGGATGAGTTTAAGACCTATT TAGACCGTGAAGATACCCAAATAATTGATTTGAGAGGTGTTGCCGAATACAATACAGGCCACATACAAGGTGCAGAAAAT GTATTTATTGGTACAATTCTACAAAATCTTGATAAAATAAGTAAAGACAAACAAATTGTTATTCATTGTCAAGGTGGAGA TAGAGCCGCAATCGGTCATTCAGTGCTTGAAAGAGCGGGCTTTAAAAATATCAAAAATTATTCTGCAGGTATGAATGAAT GGGTGAATAAAGGTAATCCAGTAGGAACTTCAGTTGCTGAAGCCATAGCTCAGTAA Protein sequence : MFFQHVYDKSLAQASYFIGCQKAGVALVIDPKRDIDTYLEIAKQNNMKITHVTETHIHADFLSGARELAAVTGAQLYLSD EGGEGWEYEFEHVGLKDGSIFYVGNLKLEVLHTPGHTPESISFLLTDQPASPEPVMLFTGDFVFVGDVGRPDLLEKAAGV AGTKEAGALEMYKSIQRFNALPDFLQVWPGHGAGSACGKALGAVPSSTVGYEKIRNWAFQYEDNKDGFVQYLLADQPEPP KYFAMMKHLNKVARPLLTEVPQQKKLSAEEVKDAMAKGVKLIDTRNKIDFAAGYVPGSINIQGNNSFATWMGWFVNYEEQ FMLVASESQIEDLTRKLMRIGLDNVLGYITDVGNLGLELQKSDVIGMDEFKTYLDREDTQIIDLRGVAEYNTGHIQGAEN VFIGTILQNLDKISKDKQIVIHCQGGDRAAIGHSVLERAGFKNIKNYSAGMNEWVNKGNPVGTSVAEAIAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 6e-87 | 43 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 5e-87 | 43 |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 2e-87 | 43 |
