Gene Information

Name : Emtol_0570 (Emtol_0570)
Accession : YP_006871751.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 259502 - 260242 bp
Length : 741 bp
Strand : -
Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: dfe:Dfer_504

DNA sequence : 
ATGAAAATTCTAGGAATAATTCCCGCAAGATTCGCTTCGAGTCGTTTCCCTGGTAAACCTTTAGTTGATATTGGAGGAAA
AAGCATGATTCAGCGTGTGTACGAACAAGCACAAAAAGCCCCAAGTCTTACGAGTGTGGCAGTAGCTACCGACGACCAAC
GAATTTATGACCACGTACTTGGTTTTGGGGGCGAAGTTTATATGACTTCTGAAAATCACCCAAGTGGAACAGACCGTTGT
TATGAAGCTTACCAAAAGGCAGGAGGAAGTAGTAAATTCGACTATGTCATTAATATTCAAGGTGATGAACCTTTTATCGA
CCCAGCTATAATTGAGCAAATGGCTGAACTACTTGATTCAAAGACAGAAATTGCTACTGCTGTAAAAAAAATTAAAGATT
ATAACATGCTTTTTGACCCTAATGTGGTGAAAGCAGTTTTGGCTTTGGGAAAACAATGCTTGTATTTTAGTCGCCAGACA
TTGCCTTATGTACGTGGTGAGGCACCCGAATCTTGGCTCGACCATGCTGATTTTTACAAGCACATTGGTCTATATGCTTA
TAGAAGTGATGTACTTGAAAAAATTGCTTTATTACAACCATCAAAGCTTGAAAATACAGAGAAGCTAGAACAACTTCGCT
GGCTAGAGCATGGCTACAAAATTTTTGCGACTATTACCGAATATGAAAGTATAGGAGTTGATACCCCCGAAGATTTAGGA
AAGTTGAAAGATTTCGTGTAA

Protein sequence : 
MKILGIIPARFASSRFPGKPLVDIGGKSMIQRVYEQAQKAPSLTSVAVATDDQRIYDHVLGFGGEVYMTSENHPSGTDRC
YEAYQKAGGSSKFDYVINIQGDEPFIDPAIIEQMAELLDSKTEIATAVKKIKDYNMLFDPNVVKAVLALGKQCLYFSRQT
LPYVRGEAPESWLDHADFYKHIGLYAYRSDVLEKIALLQPSKLENTEKLEQLRWLEHGYKIFATITEYESIGVDTPEDLG
KLKDFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 4e-34 41
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-34 41
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 4e-34 41