Gene Information

Name : Emtol_2573 (Emtol_2573)
Accession : YP_006873736.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2698945 - 2699622 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sli:Slin_4589 ABC transporter; PFAM: AB

DNA sequence : 
ATGATAAAAACTACCAACCTTCAGAAAGTATTTACAACTGAGGAAGTTGAAACAACTGCCCTCAACGGAATTTCGATTGA
AATAAAAGATGGTGAATTTGTAGCCATTATGGGGCCATCTGGCTGTGGTAAGTCAACATTACTAAATATCTTGGGCTTGC
TTGATAATCCATCGGGTGGAAGCTATGATTTTTATGGCAATGAAGTAGCTACTATGTCGGAGCGTCAGCGTGCTTCGCTT
CGTAAAGGGTCTATCGGATTCGTATTTCAAAGTTTCAATTTGATTGATGAATTAACAGTTTACGAAAACGTTGAACTTCC
ATTGTTATATTTAAAGACTCCTGCTGACGAACGTAAGCAAAAAGTAGAAACCGCTCTCGAGCGTATGAACATGATGCACC
GACGAAACCATTTTCCACAACAACTTTCGGGTGGTCAGCAGCAGCGTGTAGCCATCGCTCGTGCGGTAGTAGCCAAGCCA
AAAATGATTTTAGCCGATGAGCCTACTGGTAATTTAGATTCATCAAATGGCGAAGAAGTAATGAAGCTTTTGCAAGAACT
TAACAATGAGGGCACAACGATAGTAATGGTTACGCACTCACCTTATGATGCAGGTTTCTCGCACCGCGTTATCAATTTGT
TTGATGGAAAAGTAGTTACCGAAAACTTCCATGTATAG

Protein sequence : 
MIKTTNLQKVFTTEEVETTALNGISIEIKDGEFVAIMGPSGCGKSTLLNILGLLDNPSGGSYDFYGNEVATMSERQRASL
RKGSIGFVFQSFNLIDELTVYENVELPLLYLKTPADERKQKVETALERMNMMHRRNHFPQQLSGGQQQRVAIARAVVAKP
KMILADEPTGNLDSSNGEEVMKLLQELNNEGTTIVMVTHSPYDAGFSHRVINLFDGKVVTENFHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-30 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_2573 YP_006873736.1 ABC transporter related protein NC_008702.1.4606598. Protein 1e-37 49
Emtol_2573 YP_006873736.1 ABC transporter related protein NC_012469.1.7686878. Protein 3e-44 48
Emtol_2573 YP_006873736.1 ABC transporter related protein CP001581.1.gene798.p Protein 5e-31 46
Emtol_2573 YP_006873736.1 ABC transporter related protein NC_012469.1.7686946. Protein 3e-29 45
Emtol_2573 YP_006873736.1 ABC transporter related protein CP001581.1.gene598.p Protein 2e-30 44
Emtol_2573 YP_006873736.1 ABC transporter related protein NC_012469.1.7685735. Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_2573 YP_006873736.1 ABC transporter related protein VFG2059 Protein 2e-15 42
Emtol_2573 YP_006873736.1 ABC transporter related protein VFG0869 Protein 1e-20 41