Gene Information

Name : Emtol_2069 (Emtol_2069)
Accession : YP_006873235.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2101549 - 2102148 bp
Length : 600 bp
Strand : +
Note : PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: ran:Riean_0747 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Sugar transferase

DNA sequence :
ATGTATTTTTTTCTAAAGAATGTTGTTGATTTTATTATTGCTTTTTTTCTTATCATTATTCTTTCTCCATTGTTTTTCGT
CATTATTGCTTTGATTTTTGTTAATGGAGAATTTCCATTCTATTTTCAAAAACGAGTAGGGTTAAACGAAAAGGTATTTA
CAATTTGGAAATTCAAGACTATGAACGATAAACGAGATGAAAGTGGTGAATTGTTGTCAGATGAAAAAAGATTAACACCT
GTAGGAAGATTTATTCGTAAAAGCTCGTTAGATGAGATCCCTCAATTATTTAATGTATTAAAGGGAGAAATGAGTTTAAT
AGGTCCTCGACCTTTACTAGTTGAATATTTGCCATTATATGATAATTTTCAAAAAAAACGGCACAATGTTAAGCCAGGAA
TTACAGGTTGGGCACAAGTAAATGGGAGAAATACCCTAACGTGGCAGCAAAAATTTCAATTGGATGTGTGGTATGTAGAA
AATATATCTCTATTATTAGATGTTAAAATATTATTATACACAATTATTAAAGTTGTAAAGTCTGAAGGTATTTCTTCTGA
TGGTTCAGTAACAATGGAAAAATTTAAAGGTAATTTATAA

Protein sequence :
MYFFLKNVVDFIIAFFLIIILSPLFFVIIALIFVNGEFPFYFQKRVGLNEKVFTIWKFKTMNDKRDESGELLSDEKRLTP
VGRFIRKSSLDEIPQLFNVLKGEMSLIGPRPLLVEYLPLYDNFQKKRHNVKPGITGWAQVNGRNTLTWQQKFQLDVWYVE
NISLLLDVKILLYTIIKVVKSEGISSDGSVTMEKFKGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 8e-23 46
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-24 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_2069 YP_006873235.1 sugar transferase VFG1309 Protein 4e-23 42
Emtol_2069 YP_006873235.1 sugar transferase VFG1369 Protein 3e-22 42