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Name : Emtol_1831 (Emtol_1831) Accession : YP_006873000.1 Strain : Emticicia oligotrophica DSM 17448 Genome accession: NC_018748 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1806485 - 1807753 bp Length : 1269 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: lby:Lbys_2055 seryl-tRNA synthetase; DNA sequence : ATGCTACAACTCAATTTTATTAAAGAAAACAAACAAGCTACCATTGATAGCCTCAAACGTAAGTATTTTAAAAATGCCGA TGAGACTGTTGAAGCTGTTTTAGCCATCGACCAGAAACGTCGTGAAACACAAGCTGAACTTGATGCAACTTTAGCGAGAG CCAATGCCCTTGCCAAAGAAATTGGCGGCTTGATGAAAGCTGGAAAAAAAGAAGAAGCCGAAGCTGCGAAAGCAGAAACA GCCGAATTGAAGATAAAATCTAAAGGTTTGGAGGAAGATTTGAAAAACTCGGAAGCAGAGCTTTATGACATCATGGTTAC AATTCCGAACTTACCACACGCAAGTGTGCCAGACGGCCGTACTCCAGAAGAAAACCTCAATGTCTTTCAAGCTGGAGAAA TACCTACTTTGCACGAAGATGCTTTACCACACTGGGAACTCATTAAGAAATACGACATAATTGATTTTGATTTAGGAAAT AAAATCACAGGAGCGGGATTTCCAGTTTATAAGGGAAAAGGAGCAAGAATCCAACGAGCTATGATTAACTTCTTTTTAGA TGAAGCATTAGCAGCGGGGTATTTTGAAATTCAACCACCAATTTTAATTAATAAAGATTCTGGTTTCGGAACTGGTCAGT TGCCTGACAAAGAAGGACAAATGTACCATGCAACTGTAGATGATTTGTATTTGATTCCTACGGCGGAAGTTCCAGTAACA AATATTTACCGCGATGTTATTTTATCAGATGCGGAGTTACCAATTAAAAATGTGGCTTACACGCCTTGTTTCCGTCGTGA AGCAGGAAGCTGGGGGGCTCACGTGCGTGGTTTGAATCGTTTGCACCAATTCGATAAAGTTGAAATCGTACAAGTTCGCA AGCCTGAAGAATCATATCAAGCTCTAGATGAGATGGTAGAACACGTAAAATCATTGCTTGAAAAATTAGAATTACCTTAC CGTATTCTTCGCCTATGTGGTGGCGATATGGGCTTTACTTCAGCTTTGACTTATGATTTTGAAGTATATTCTGCGGCTCA AAAACGCTGGTTAGAAGTAAGTTCAGTTTCAAACTTTGAATCATATCAAGCTAATCGTTTGAAACTTCGTTATAAAGTAG ATGGTAAAACTCAACTTTTGCACACACTCAACGGTTCGGCCTTAGCATTACCACGTATTTTGGCATCAATTTTAGAAAAT TCTCAAACACCAGAAGGTATCAAAATACCAAAAGCATTAGTGCCTTACTGTGGTTTTGAAATGATATAA Protein sequence : MLQLNFIKENKQATIDSLKRKYFKNADETVEAVLAIDQKRRETQAELDATLARANALAKEIGGLMKAGKKEEAEAAKAET AELKIKSKGLEEDLKNSEAELYDIMVTIPNLPHASVPDGRTPEENLNVFQAGEIPTLHEDALPHWELIKKYDIIDFDLGN KITGAGFPVYKGKGARIQRAMINFFLDEALAAGYFEIQPPILINKDSGFGTGQLPDKEGQMYHATVDDLYLIPTAEVPVT NIYRDVILSDAELPIKNVAYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQVRKPEESYQALDEMVEHVKSLLEKLELPY RILRLCGGDMGFTSALTYDFEVYSAAQKRWLEVSSVSNFESYQANRLKLRYKVDGKTQLLHTLNGSALALPRILASILEN SQTPEGIKIPKALVPYCGFEMI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-66 | 43 |
