Gene Information

Name : Emtol_1338 (Emtol_1338)
Accession : YP_006872514.1
Strain : Emticicia oligotrophica DSM 17448
Genome accession: NC_018748
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1187405 - 1188127 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sli:Slin_1838 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter rel

DNA sequence : 
ATGACAACGAATAAAAATATTGTAGAAAAAGTAGCTCCTCAATCGGGGGCAGGGGCTGTACTCTCTGCTACTAATATCAA
CAAGTATTTCTATGAACCTGAAAAATTTCAGGTCTTAAAAAATATTTCTTTTGAAGCGAAAAAAGGCGAGTTTTTATCAT
TAATAGGCAAATCTGGTTGTGGAAAATCAACACTTTTATACATTTTATCAACCATGGACACCGAATATGAAGGTAGCCTA
ACAATGAACGGCCAATTACTTACTGGCCGAACGCAAGACCAGTTAGCTGCCTTTCGAAATGAGCATTTGGGGTTTGTTTT
CCAGTTTCATTTTCTTTTACCTGAGTTTACAGTCTTACAAAATGTAATGCTTCCAGCCATGAAGCTGAGTAAATATTCAT
TAAAAGAAATTGAAGAGCGGGCTTATCAAAAACTCAAACTCGTTGATATGCACGAACATGCCCACAAACAATCGTCTAAG
CTTTCGGGTGGACAGCAGCAAAGGGTGGCCATTGCACGTGCTTTAATCAATGACCCAACAATATTGATGGGCGATGAGCC
GACAGGCAACCTTGATAAAAAGAATTCGGCTGTTGTTTTTGATATTTTTAAACAAATTGCCCACGAAAATAACCAAACAA
TTATTGCTGTAACCCACGACCCCGATTTTGCGAAAGGAAGTGATAGAATTATTGAAATGTCGGACGGACAAATTATAACA
TGA

Protein sequence : 
MTTNKNIVEKVAPQSGAGAVLSATNINKYFYEPEKFQVLKNISFEAKKGEFLSLIGKSGCGKSTLLYILSTMDTEYEGSL
TMNGQLLTGRTQDQLAAFRNEHLGFVFQFHFLLPEFTVLQNVMLPAMKLSKYSLKEIEERAYQKLKLVDMHEHAHKQSSK
LSGGQQQRVAIARALINDPTILMGDEPTGNLDKKNSAVVFDIFKQIAHENNQTIIAVTHDPDFAKGSDRIIEMSDGQIIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_1338 YP_006872514.1 ABC transporter related protein NC_012469.1.7686878. Protein 1e-28 43