|
Name : BgCN_0293 (BgCN_0293) Accession : YP_006870984.1 Strain : Borrelia garinii NMJW1 Genome accession: NC_018747 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : - COG ID : - EC number : - Position : 296508 - 297818 bp Length : 1311 bp Strand : - Note : - DNA sequence : GTGAGCAATTTTTTTGAAAATTATTTAAGACAAGTAGATGATATTGAAACCGTCTCTTTTGTTGGCAGGGTGCAAAAAAT AAAGGGTCTTTTAGTTGAAAGTTTGGGGCCTCAGTGTGCTGTTGGGGATTTATGTTTAATTGATCAAAGGAATAATAAAA AGGTATGTGCTGAGGTTTTGGGCTTTAATGGGCCTTATGTTAGTCTTATGACTTATGAGGGATTTAGCGGAATTGAAGTT GGGAATAAAGTCTATTCTTTAAATAAAGGGCTAGAAATAAATCTTAGTGATGAGCTTTTAGGAAGGGTTATTGATTCTCT TGGTAGGCCCATTGATAATAAAGGGTCATTTTTAAAAAATAGATATAAAGAGTTAACTTTTGAGAAAATTAATCCAATTA ATAGAAGTATTTTCGAAGAACAAATATTAACAGGAGTTAAAGCTCTTGATGGGTTTTTGCCAGTCGCAAAAGGGCAAAGA GTTGGTATTTTTTCTGGTGCTGGCGTTGGTAAATCTACTTTGCTTGGCATGATTGCAAAGAATTCAAATGCAGATGTAAA CGTTATAGCTTTTATTGGGGAAAGAGGTCGAGAGCTTAATGAGTTTATTGAACACGAGCTTGGTGAGGAGCGTTTAAAAA AAAGTGTTTTAGTTGTTTCAACTTCTGATGAATCACCTATATCAAGGTATAAAGGAGCTTATGTTGCTACCATGATAGCG GAATACTTTAGAGATCAAGGTAAAGATGTAGCTTTGCTTTTTGATTCTATTACTAGGTTTGCTAATGCTAAAAGGGAGAT GTCTCTTTCTTTAGGAGAGCCTCCGGTATCTAAAGGCTATCCGCCTTCTGTTTTTGTTGAAATTCCAATTTTACTTGAGA GATCAGGGTTTAATGGTAATGGAGGAAGTGTTACTGGGTTTTATACTGTTCTTGTTGAGGGAGATGATTTTACAGAGCCT GTAGCCGATAATATTAAGGCTGTTTTAGATGGTCATATTATTTTAGACAGAGATCTATTTGACAGAGGAATTTATCCTTC AATAAATATTCTTAGTTCAACTTCAAGATCTATTAATAGGATAATGAGTTTAGAAAAACAAAAATTAATAATGAAAGCTA GAAATTTATTGTCTATTTATAAAGATTATGAAGATCTTATTAGAACTGGTATTTATATCAAAGGATCCAATAAGGATGTT GATTTTGCAATTTCCAAGTATCCCAAGATTATTGATTTTATTTCTCAAGGAATAAATGAGATATTTGATTTTGAAAATTT AGAAGATGAAATAAGGGCAATATTATCTTGA Protein sequence : MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPYVSLMTYEGFSGIEV GNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINPINRSIFEEQILTGVKALDGFLPVAKGQR VGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIA EYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVSKGYPPSVFVEIPILLERSGFNGNGGSVTGFYTVLVEGDDFTEP VADNIKAVLDGHIILDRDLFDRGIYPSINILSSTSRSINRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYIKGSNKDV DFAISKYPKIIDFISQGINEIFDFENLEDEIRAILS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 1e-79 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-79 | 44 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-77 | 44 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 7e-80 | 43 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 9e-80 | 43 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-80 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 9e-83 | 43 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-82 | 43 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-83 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-83 | 42 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-83 | 42 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-84 | 42 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-84 | 42 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-83 | 42 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-76 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 8e-63 | 41 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-82 | 41 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 1e-71 | 41 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 3e-71 | 41 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 3e-71 | 41 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 1e-71 | 41 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 1e-71 | 41 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 1e-71 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 2e-66 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 1e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 4e-95 | 47 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 4e-82 | 44 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 6e-84 | 44 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG2499 | Protein | 4e-79 | 44 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 2e-81 | 43 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 4e-80 | 43 |
| BgCN_0293 | YP_006870984.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 2e-81 | 41 |
