Gene Information

Name : Emtol_0288 (Emtol_0288)
Accession : YP_006870449.1
Strain :
Genome accession: NC_018742
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 133085 - 133768 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: shg:Sph21_3356

DNA sequence : 
ATGAAAATACTACTAATAGAAGACGATTTACGGGTATCGAACCTGATTCAGAGAGGTTTAAACGAAAATGGCTTTCATAC
TGAGTTGGTTTATGATGGCATGTTGGGTCTAAAACTTGCCAATCAATATGAATTTGACCTTATTATAACAGACATTATTC
TACCCAAAATGGATGGGTTAGAATTATGCAAAAAATTGAGAGAATTAAACAATGAAACTCCTATATTGATGCTTACAGCT
CTCGGCACAACCGATGATAAAGTAGAAGGTTTTGATGCCGGGGCAGATGATTATTTAGTCAAACCCTTCGAAATGCGAGA
GTTACTGGCAAGAGTGAGAGCACTGATAAAAAGAAAGAATAATCAACATTCTAATTATAATGTGATTATTAAATATGATA
CAATTGAATTAAATACCCAAACTAAAATTGTGAAAAGAGAAGGAAGAGAACTCAGTCTTACGCCCAAAGAGTTCAAATTG
TTCGAATTTATGTTGCTGAATCCAGAAAGGGTTTTGATGCGAAGTGAGATAAGCGAAAAGGTCTGGGAAACGCATTTCGA
TACAGGTACTAATTTTATAGATGTTTATATCAATTATTTAAGGAAGAAGGTTGATAAAGATTTTGACACAAAACTGATTC
ATACAAAGCCGGGCATGGGATTTATCTTAAAAAGAGAATTATGA

Protein sequence : 
MKILLIEDDLRVSNLIQRGLNENGFHTELVYDGMLGLKLANQYEFDLIITDIILPKMDGLELCKKLRELNNETPILMLTA
LGTTDDKVEGFDAGADDYLVKPFEMRELLARVRALIKRKNNQHSNYNVIIKYDTIELNTQTKIVKREGRELSLTPKEFKL
FEFMLLNPERVLMRSEISEKVWETHFDTGTNFIDVYINYLRKKVDKDFDTKLIHTKPGMGFILKREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-37 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family BAC0111 Protein 4e-43 45
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family BAC0125 Protein 4e-41 42
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family BAC0347 Protein 4e-38 42
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family BAC0308 Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family VFG0596 Protein 1e-37 42
Emtol_0288 YP_006870449.1 two component transcriptional regulator, winged helix family VFG1390 Protein 2e-47 42