Gene Information

Name : P700755_003888 (P700755_003888)
Accession : YP_006869211.1
Strain : Psychroflexus torquis ATCC 700755
Genome accession: NC_018721
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4139480 - 4142065 bp
Length : 2586 bp
Strand : +
Note : -

DNA sequence :
ATGGATTTTAAAAACTTCACCATAAAAACACAAGAAGCTTTACAAAAAGCTCAGTTACTTGCTCAAGAACTTGGACATCA
GCAAATAGAGAACGAACATATTTTTAAAGCTATAACCCAAGTCGATGAAAATGTAACTCCTTTTCTATTGAAGAAGCTCA
ATGTCAATACTCAATTGTTTCTTCAAATTTTAGATAAAAATTTAGAGAGTTTTCCAAAAGTAACCGGAGGTGATATTGTA
TTATCCAGAGAAGCGGGTAAAACCGTTAACGAGGCTAGCATTATTGCTAAAAAAATGAATGACGAATATGTTTCTATTGA
ACATTTAATTTTAGCTATTTTTAAAAGTAAGAGTAAGATTGCTCAAGTTTTAAAAGATCAAGGGGTTACAGAAAAAGCTC
TAGAATCTGCTATACAAGAACTTCGCCAAGGCAATCAAGTAACTTCTCAAAATGCAGAAGATAATTATAATTCTTTAGAA
AAATATGCCAATAACTTAAACGAACTTGCTGAAGAAGGAAAGTTAGACCCGGTTATAGGTAGAGATGAAGAAATACGAAG
AATTCTCCAAATTCTTTCTCGGAGGACTAAGAATAATCCAATGCTTGTTGGTGAGCCTGGTACTGGTAAGACAGCTATTG
CAGAAGGTCTTGCTCACAGAATTATTGCTGGAGATGTTCCTGAAAACCTAAAATCTAAAAAGATTTATAGCCTTGATATG
GGAGCGTTAATTGCAGGTGCTAAATATAAAGGAGAGTTTGAAGAACGATTAAAATCGGTTATCAAGGAAGTGCAAGATAG
TGATGGAGATATTGTCTTATTTATAGACGAGATCCATACTCTTGTAGGGGCTGGAGGAGGACAAGGTGCAATGGATGCCG
CTAATATTTTAAAACCAGCCTTAGCTAGAGGTGAATTAAGAGCAATAGGAGCTACAACATTAGATGAATTTCAAAAATAC
TTTGAAAAAGATAAAGCCTTAGAAAGACGTTTTCAAAAGGTAATTGTGAATGAACCAGATACCGAAAGTGCTATTTCGAT
CCTAAGAGGAATTAAAGAGAAGTATGAAGCTCATCATAAAGTCCGGATTAAAGATGAGGCCATCATAGGAGCTGTGGAAC
TTTCTCAACGCTATATTACCAATAGATTTCTTCCTGATAAAGCCATCGATTTAATGGATGAGGCCGCTTCAAAATTAAGG
ATGGAAATAAATTCGAAGCCTGAAGAATTGGATGTACTCGATAGGAAAGTCATGCAGTTGGAAATAGAAATTGAGGCCAT
TAAGCGTGAAAAAGATGAAACTAAATTAAAATCGCTTAGAGTAGACTTGGCAGACCTTAAGGATGAGCGCAATACGCTTC
ACGCCCGATGGAAAAATGAAAAAGATGTGGTTGATAATATTCAGAGATTAAAAACTGATATTGAAGACTATAAACTAGAA
GCAGAACGAGCAGAGCGCGAGGGTGATTATGGCAAAGTAGCTGAATATAGGTACGGCAAAATAAAAGAAACTCAAGAACA
ACTCAGTAAATTACAAGAACAAGTCGAAAGCCAGAAAACCAAAAACACTCTTATTAAAGAAGAGGTTGATTACGAAGATA
TTGCAGAAGTAGTTGCCAAATGGACAGGAATTCCAGTGACAAAAATGCTTCAATCTGATAGAGAAAAACTCTTAAAACTT
GAAGATCAATTGCACAAAAGGGTTGTTGGACAGGAGGAAGCCATACAAGCGGTCTCTGATGCCGTAAGGCGAAGTCGTGC
TGGCCTTCAAGACCAAAATAGACCAATTGGATCTTTTCTCTTCCTAGGTACTACAGGTGTGGGTAAAACGGAATTAGCCA
AAGCGCTTGCAGAATATATGTTTGACGATGAAAGCTCGATGACACGTATAGATATGAGTGAATATCAAGAAAGACATTCC
GTAAGTCGATTGGTAGGAGCACCTCCAGGCTATGTAGGTTATGAAGAAGGTGGACAATTAACGGAAGCGGTAAGAAGAAA
GCCATATTCTGTTATACTTTTAGATGAAATTGAAAAGGCCCACCCAGACACGTTTAATATTTTATTGCAGGTTTTGGATG
AAGGTCGACTCACAGATAATAAAGGTCGACTTGCAGATTTCAAAAATAGTATCATAGTCATGACCTCTAACATTGGAAGT
CATATTATCCAAGAAAAATATGATACGACTAAAGATGTTGAAAGTGCAATGGAAAGTGCTAAAGTGGACGTTCTAGGCTT
ATTAAGACAAAGTGTAAGACCAGAATTTCTAAATAGAATTGATGATGTGGTTATGTTCACTCCATTATCGAAAAACAACA
TTAAGGAAATTGTTGGGTTACAGCTCAAGGGTCTTAAAAAGATGTTGATGAAACAAGGTATTACTATAGATGCTACAGAA
CAAGCTATCGAGTATATAGCCAAGATTGGCTTTGATCCACAATATGGAGCAAGACCTGTTAAGAGGACGATCCAAAAAGA
AGTCCTTAACATCCTATCAAAAGAGATTTTAGCCGAAAAAATCAAAACCGATAGCATTATCCTTTTAGATCAATTTGATG
ACAAGCTGATTTTTAGAAACCAATAA

Protein sequence :
MDFKNFTIKTQEALQKAQLLAQELGHQQIENEHIFKAITQVDENVTPFLLKKLNVNTQLFLQILDKNLESFPKVTGGDIV
LSREAGKTVNEASIIAKKMNDEYVSIEHLILAIFKSKSKIAQVLKDQGVTEKALESAIQELRQGNQVTSQNAEDNYNSLE
KYANNLNELAEEGKLDPVIGRDEEIRRILQILSRRTKNNPMLVGEPGTGKTAIAEGLAHRIIAGDVPENLKSKKIYSLDM
GALIAGAKYKGEFEERLKSVIKEVQDSDGDIVLFIDEIHTLVGAGGGQGAMDAANILKPALARGELRAIGATTLDEFQKY
FEKDKALERRFQKVIVNEPDTESAISILRGIKEKYEAHHKVRIKDEAIIGAVELSQRYITNRFLPDKAIDLMDEAASKLR
MEINSKPEELDVLDRKVMQLEIEIEAIKREKDETKLKSLRVDLADLKDERNTLHARWKNEKDVVDNIQRLKTDIEDYKLE
AERAEREGDYGKVAEYRYGKIKETQEQLSKLQEQVESQKTKNTLIKEEVDYEDIAEVVAKWTGIPVTKMLQSDREKLLKL
EDQLHKRVVGQEEAIQAVSDAVRRSRAGLQDQNRPIGSFLFLGTTGVGKTELAKALAEYMFDDESSMTRIDMSEYQERHS
VSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNSIIVMTSNIGS
HIIQEKYDTTKDVESAMESAKVDVLGLLRQSVRPEFLNRIDDVVMFTPLSKNNIKEIVGLQLKGLKKMLMKQGITIDATE
QAIEYIAKIGFDPQYGARPVKRTIQKEVLNILSKEILAEKIKTDSIILLDQFDDKLIFRNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-102 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P700755_003888 YP_006869211.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-108 43
P700755_003888 YP_006869211.1 ATP-dependent chaperone ClpB VFG2076 Protein 3e-123 42