Gene Information

Name : P700755_003407 (P700755_003407)
Accession : YP_006868793.1
Strain : Psychroflexus torquis ATCC 700755
Genome accession: NC_018721
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-galactosamine dehydrogenase, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3604061 - 3605341 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTATCCAAAAATTGCAATTATTGGCTTAGGATATGTAGGACTCCCCCTAGCTGTGGCTTTTGCTAAAAAATATCC
TGTGGTGGGTTTTGATATAAATCAATCTCGAGTAGATGAATTAAATAGCGGCACCGATCATACCTTAGAAGTTTCAGATA
AGGATTTAAAGGAGGCGCTAACTAACAACGATTCTCCTGTCATGAAGTTGTCTACAGAGTCGAATGACATGAAAGAAGCG
ACCATATTTATTGTAACTGTGCCCACTCCAACAGACAAAAACAGGCAACCAGTTTTAACCCCTTTAATAAAAGCCAGCGA
AACCATTGGGGGCATTCTTAAAGATGGTGATATTGTTATTTATGAGTCTACAGTATATCCGGGAGTAACGGAGGAAGTCT
GCGTTCCTGTTTTGGAACAATTTTCTGGTAAGACCTTCAACAAAGACTTTTTTGCAGGCTATTCTCCTGAAAGAATTAAT
CCAGGAGATAAAGAACATACAATTACTACTATACTGAAGGTCACCTCAGGGTCTACTCCAGAAATTGCAAAAAGAGTAGA
CGATTTATATGCTTCGATTATTACAGCAGGAACTCATTTAGCCACTAGCATAAAAGTAGCGGAAGCTGCCAAAGTGATTG
AAAATTCGCAAAGAGACATCAATATTGCTTTTGTAAACGAATTGTCGAAAATTTTTAGACTACTGGATATAGATACTAAC
GATGTGCTAGAGGCTGCAGCGACCAAATGGAACTTTATAAAGTTTTCTCCTGGTTTAGTAGGTGGACATTGTATAGGTGT
AGATCCATATTATCTAGCTCAAAAGGCTTTGGAAGTAGGCTATAATCCTGAAATTATTTTATCTGGTCGTCGAATAAACG
ATGGGATGGGGAAATATGTAGCCAGTGAGGTTATAAAATTAATGCTCAATAAAGAAACAAAAATAAAAAACGGAAAGGCT
TTAGTATTAGGCGTCACCTTTAAGGAGAACTGCCCAGATACTCGTAATACCAAAGCAATTGACGTGATAGAAGAATTGAA
AAAATACAATATGGATGTAGACGTTTGTGACCCTTGGGCTGATAAACAAGAGGTGAAGACTTTATTTGATATTGACTTAT
TGAGGTGTGAAGATCTCAAATTAACCTATGACACTATAATCTTAGCTGTATCTCACAATGAGTTTTTAAACTTAGATTTT
GAGGCTTTAAAAAATGAAAATGCAGTTATTTTTGATGTGAAATCTTTTTTACCAACCGATAAAATTGACGGCCGATTATG
A

Protein sequence :
MSYPKIAIIGLGYVGLPLAVAFAKKYPVVGFDINQSRVDELNSGTDHTLEVSDKDLKEALTNNDSPVMKLSTESNDMKEA
TIFIVTVPTPTDKNRQPVLTPLIKASETIGGILKDGDIVIYESTVYPGVTEEVCVPVLEQFSGKTFNKDFFAGYSPERIN
PGDKEHTITTILKVTSGSTPEIAKRVDDLYASIITAGTHLATSIKVAEAAKVIENSQRDINIAFVNELSKIFRLLDIDTN
DVLEAAATKWNFIKFSPGLVGGHCIGVDPYYLAQKALEVGYNPEIILSGRRINDGMGKYVASEVIKLMLNKETKIKNGKA
LVLGVTFKENCPDTRNTKAIDVIEELKKYNMDVDVCDPWADKQEVKTLFDIDLLRCEDLKLTYDTIILAVSHNEFLNLDF
EALKNENAVIFDVKSFLPTDKIDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-110 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-110 56
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-110 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P700755_003407 YP_006868793.1 UDP-N-acetyl-D-galactosamine dehydrogenase, putative VFG0431 Protein 5e-111 56